Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320F08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   0.88 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.5  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   6.2  
AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein prot...    23   6.2  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   6.2  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   8.2  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 41   TTSWMLIGVVFRCLDSIEMSALSVRAPGLQATTTVLDTRSLR-VRGVTALDGVR 199
            T +W  +  +   +  I   A    A G+QA  T+   R+LR +R ++ + G+R
Sbjct: 1368 TNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMR 1421


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 266  QLELDSQRWGFDFANEQPLPGIQRFAWQLVPASAVPVA 379
            Q +   +R  F F N   LPG++  A +L  A+   VA
Sbjct: 1285 QQQQQMERQQFGFGNNDNLPGVEEVAAELENANESEVA 1322


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 100 CFECEGARPTGHDDCA 147
           C +C G    GH DCA
Sbjct: 704 CLKCGGPHTIGHPDCA 719


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 100 CFECEGARPTGHDDCA 147
           C  C GA   GH +CA
Sbjct: 550 CALCGGAHHIGHSECA 565


>AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein
           protein.
          Length = 90

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 176 VTALDGVRRNLFGCTDRE 229
           ++ L+ +R NL GC++RE
Sbjct: 57  LSRLEQMRHNLTGCSERE 74


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 137 SWPVGRAPSHSKQTSQ*SPNSETQHRL 57
           S PV   P+H   TSQ +P S T   +
Sbjct: 380 SHPVTDWPTHQPTTSQENPESVTDEEI 406


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +1

Query: 100 CFECEGARPTGHDDC 144
           C  C G    GH DC
Sbjct: 406 CAVCSGPHRVGHSDC 420


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,472
Number of Sequences: 2352
Number of extensions: 10742
Number of successful extensions: 84
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)