Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320F08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50796-3|CAA90667.1| 184|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AF179358-1|AAF13868.1| 184|Caenorhabditis elegans cyclin-depend... 54 8e-08
Z50796-4|CAA90670.1| 258|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 31 0.50
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 30 0.87
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68337-5|CAA92743.1| 230|Caenorhabditis elegans Hypothetical pr... 28 3.5
AC087232-5|ABA00173.1| 271|Caenorhabditis elegans Hypothetical ... 27 6.2
AC087232-4|AAK09080.2| 637|Caenorhabditis elegans Hypothetical ... 27 6.2
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 27 6.2
>Z50796-3|CAA90667.1| 184|Caenorhabditis elegans Hypothetical
protein T05A6.1 protein.
Length = 184
Score = 53.6 bits (123), Expect = 8e-08
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Frame = +2
Query: 185 LDGVRRNLFGCTDREENRR---FVERELARQLELDSQRWGFDFANEQPLPGIQRFAWQLV 355
+ RR LFG E+ R ++E + R + +SQ+WGFDF E PLP F ++++
Sbjct: 1 MSSARRCLFGRPTPEQRSRTRIWLEDAVKRMRQEESQKWGFDFELETPLPSSAGFVYEVI 60
Query: 356 PASAVPVALRRSPI---TTSMPKQNTSTQEAKVSSPESTKTQK 475
P + VP R + TT +ST +SSP ++ ++
Sbjct: 61 PENCVPEFYRTKVLTVRTTCSSLDISSTTLTPLSSPSTSDKEE 103
>AF179358-1|AAF13868.1| 184|Caenorhabditis elegans cyclin-dependent
kinase inhibitor protein.
Length = 184
Score = 53.6 bits (123), Expect = 8e-08
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Frame = +2
Query: 185 LDGVRRNLFGCTDREENRR---FVERELARQLELDSQRWGFDFANEQPLPGIQRFAWQLV 355
+ RR LFG E+ R ++E + R + +SQ+WGFDF E PLP F ++++
Sbjct: 1 MSSARRCLFGRPTPEQRSRTRIWLEDAVKRMRQEESQKWGFDFELETPLPSSAGFVYEVI 60
Query: 356 PASAVPVALRRSPI---TTSMPKQNTSTQEAKVSSPESTKTQK 475
P + VP R + TT +ST +SSP ++ ++
Sbjct: 61 PENCVPEFYRTKVLTVRTTCSSLDISSTTLTPLSSPSTSDKEE 103
>Z50796-4|CAA90670.1| 258|Caenorhabditis elegans Hypothetical
protein T05A6.2a protein.
Length = 258
Score = 37.9 bits (84), Expect = 0.004
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Frame = +2
Query: 179 TALDGVR---RNLFGCTDREENRRFVERELARQLELDSQRWGFDFANEQPLPGIQ-RFAW 346
TA DG R R LFG D EE R + L + DS+++ FDF+ P+ G + + +
Sbjct: 5 TAGDGKRKAARCLFGKPDPEEVSRQLNSSLEEMYKKDSRKFNFDFSGGVPIVGSRGDYEF 64
Query: 347 QLVPASAVP-------------VALRRS-PI--TTSMPKQNTSTQEAKVSSPESTKTQKR 478
+ + AS VP +A R S P+ T MP ++ E+ + T
Sbjct: 65 ESISASEVPSFYREKIVRPRKIIARRNSTPVSDTVEMPSESPPVVESNETPLLIASTSTE 124
Query: 479 ITDFLKPRKRLS 514
+T + KP R S
Sbjct: 125 VTVYEKPVTRSS 136
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 298 RFCK*TTFTGHSEIRVAISTSVCSSGSVKKVTDHNLDAE 414
RF +T H +++V + CS KKV+D NL AE
Sbjct: 262 RFGNQSTVFVHCQVQVCLKKDECSKTCYKKVSDSNLTAE 300
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 356 PASAVPVALRRSPITTSMPKQNTSTQEAKVSSPESTKTQKRI 481
P ++ ALR S +T +Q+TST +A SS S + KR+
Sbjct: 823 PKASSSTALRPSTSSTPSQQQSTSTAKAMTSSSTSAEDAKRL 864
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 221 DREENRRFVERELARQLELD-SQRWGFDFANEQPLPGIQRFAWQLVPASAVPVALRRSPI 397
++EE R ++ ++E + +QR+G F + PL +R +L+PA R
Sbjct: 31 EKEEEREACKKRYLERIEREEAQRFGKQFKID-PLTFAERLERKLIPAEKKQ---RYREF 86
Query: 398 TTSMPKQNTSTQEAKVSSPESTKTQKRITDFL 493
+ T V + ES KT+ ++ DFL
Sbjct: 87 IPCVVDHFGGTDVHFVKAMESIKTENQLLDFL 118
>Z68337-5|CAA92743.1| 230|Caenorhabditis elegans Hypothetical
protein M7.8 protein.
Length = 230
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 207 KFLLTPSRAVTPRTRSDLVSSTVVVACRPGAL--TLKADISIESKQRNTTPI 58
KFLL R P R+ +S + C GAL LK + SI ++ ++T I
Sbjct: 27 KFLLESFRVDEPLNRASKISCEEIEKCLDGALDRALKTESSILARSQDTHEI 78
>AC087232-5|ABA00173.1| 271|Caenorhabditis elegans Hypothetical
protein Y92H12BR.3b protein.
Length = 271
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 395 ITTSMPKQNTSTQEAKVSSPESTKTQKRITDFLK 496
I + PK T K+S PES K +TD++K
Sbjct: 26 ICANPPKTTPKTLSDKISLPESYKISGSMTDWMK 59
>AC087232-4|AAK09080.2| 637|Caenorhabditis elegans Hypothetical
protein Y92H12BR.3a protein.
Length = 637
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 395 ITTSMPKQNTSTQEAKVSSPESTKTQKRITDFLK 496
I + PK T K+S PES K +TD++K
Sbjct: 26 ICANPPKTTPKTLSDKISLPESYKISGSMTDWMK 59
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 89 IEMSALSVRAPGLQATTTVLDTRSLRVRGVTALDGVRR 202
I+MS L+ AP L+ +LD + + +++L+GVR+
Sbjct: 101 IDMSILARNAPRLKVL--ILDDNQIHIGSISSLNGVRK 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,758,666
Number of Sequences: 27780
Number of extensions: 233892
Number of successful extensions: 888
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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