Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320F06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 56  RQEMHLQSYLF*SETSLGSL 115
           RQE+H Q Y+  ++ S+GS+
Sbjct: 91  RQEVHAQVYVCLAKNSVGSV 110


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = -2

Query: 175 YIYVFVSLW--TYFFV 134
           +IY+FVS+W    FFV
Sbjct: 297 FIYMFVSVWKCLLFFV 312


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = -2

Query: 175 YIYVFVSLW--TYFFV 134
           +IY+FVS+W    FFV
Sbjct: 297 FIYMFVSVWKCLLFFV 312


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = -2

Query: 175 YIYVFVSLW--TYFFV 134
           +IY+FVS+W    FFV
Sbjct: 297 FIYMFVSVWKCLLFFV 312


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = -2

Query: 175 YIYVFVSLW--TYFFV 134
           +IY+FVS+W    FFV
Sbjct: 297 FIYMFVSVWKCLLFFV 312


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 490 PPDPITVLLDTSST 449
           PP+PI+  L TS++
Sbjct: 318 PPEPISASLSTSNS 331


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 490 PPDPITVLLDTSST 449
           PP+PI+  L TS++
Sbjct: 107 PPEPISASLSTSNS 120


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 490 PPDPITVLLDTSST 449
           PP+PI+  L TS++
Sbjct: 107 PPEPISASLSTSNS 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,586
Number of Sequences: 336
Number of extensions: 2923
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)