Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320F03f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9SFB7 Cluster: Putative polygalacturonase; n=2; Arabid...    34   2.3  
UniRef50_Q23GY9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.3  
UniRef50_Q2SYW8 Cluster: Glycosyltransferase, putative; n=2; Bur...    32   6.9  
UniRef50_Q2SCJ4 Cluster: Predicted acyltransferase; n=1; Hahella...    32   6.9  
UniRef50_UPI0000E87B05 Cluster: Tyrosine recombinase XerC; n=1; ...    32   9.2  
UniRef50_Q4JF86 Cluster: FLRFamide protein B; n=2; Procambarus c...    32   9.2  

>UniRef50_Q9SFB7 Cluster: Putative polygalacturonase; n=2;
           Arabidopsis thaliana|Rep: Putative polygalacturonase -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 438

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +1

Query: 382 THNQHQ-SLNAINCQICDEHGYV--RVPRSYNVNQYFERAQKHDDQQ 513
           T+ QHQ   N  N  + + HGY     PRS+NVN +  +A  +DD +
Sbjct: 41  TNRQHQHGHNTRNSHLKNRHGYAPRSSPRSFNVNTFGAKANGNDDSK 87


>UniRef50_Q23GY9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 468

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +1

Query: 316 DYDATAAQTLTSNANLLDSQRYTHNQHQSLNAINCQICDEHGYVRVPRSYNVNQYFERAQ 495
           D D   +Q + S+  L    + T+NQ Q+ N IN    +   Y +VPRS   +Q  +   
Sbjct: 237 DQDQQNSQQIESSTALQPQIQQTNNQSQANNNINVYQKEAKSYRKVPRSSRYDQ--QNEN 294

Query: 496 KHDDQQI 516
           K DD ++
Sbjct: 295 KIDDDKV 301


>UniRef50_Q2SYW8 Cluster: Glycosyltransferase, putative; n=2;
           Burkholderiaceae|Rep: Glycosyltransferase, putative -
           Burkholderia thailandensis (strain E264 / ATCC 700388 /
           DSM 13276 /CIP 106301)
          Length = 431

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -2

Query: 448 GHSHVHHRFDSLWHSVTDVGCACIFVNLKGWHLMSMFVQLLRRN 317
           GH+ V   FD+LW    +V    + V   GWH +   VQ LRR+
Sbjct: 268 GHAQVLDAFDALWRDGAEV--TLVVVGAPGWH-VEPIVQRLRRH 308


>UniRef50_Q2SCJ4 Cluster: Predicted acyltransferase; n=1; Hahella
           chejuensis KCTC 2396|Rep: Predicted acyltransferase -
           Hahella chejuensis (strain KCTC 2396)
          Length = 625

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 328 LRRNHYRLVILH*AVLHKDHPYAPMTF 248
           +R+N YR+++LH A LH D+P +   F
Sbjct: 467 IRKNKYRVIVLHAAWLHPDYPLSSEEF 493


>UniRef50_UPI0000E87B05 Cluster: Tyrosine recombinase XerC; n=1;
           Methylophilales bacterium HTCC2181|Rep: Tyrosine
           recombinase XerC - Methylophilales bacterium HTCC2181
          Length = 300

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 274 PYVIQPSVRSQV-DSDYDATAAQTLTSNANLLDSQRYTHNQHQSLNAI 414
           P++++ S  S +  S  D  A Q L  +AN+  +Q YTH  +Q L+ I
Sbjct: 238 PHLLRHSFASHLLQSSQDLRAVQELLGHANISTTQIYTHLDYQHLSKI 285


>UniRef50_Q4JF86 Cluster: FLRFamide protein B; n=2; Procambarus
           clarkii|Rep: FLRFamide protein B - Procambarus clarkii
           (Red swamp crayfish)
          Length = 323

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 316 DYDATAAQTLTSNA--NLLDSQRYTHNQHQSLNAINCQICDEHGY 444
           DYD +  +TL  +      +  R+  + ++ LNA++C  CDEH Y
Sbjct: 123 DYDNSDDETLNDSLVKRSRNFLRFGRSVNRQLNALSCDGCDEHNY 167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.311    0.125    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,795,887
Number of Sequences: 1657284
Number of extensions: 7110011
Number of successful extensions: 14134
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14107
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)