Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320F02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 32 0.22
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 32 0.22
AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical ... 31 0.50
AC024785-2|AAF60599.2| 467|Caenorhabditis elegans C-type lectin... 31 0.66
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 29 2.0
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 29 2.0
AF025461-6|AAK84545.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.7
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 28 4.7
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 28 4.7
L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.22
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 68 LREAMINLFG-TESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSI 244
LR + L G ++S K L ++H++ + S +S HYSPS S KD I
Sbjct: 699 LRRIKLKLLGHSQSGKTRLVQTLHSSRGISSFLESVTRRISDHYSPSSS---MKD--DGI 753
Query: 245 TSSIGNFTMDSNTLSAY 295
S+ G+F +SN S++
Sbjct: 754 HSTNGSFVSESNNNSSF 770
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.22
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 68 LREAMINLFG-TESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSI 244
LR + L G ++S K L ++H++ + S +S HYSPS S KD I
Sbjct: 699 LRRIKLKLLGHSQSGKTRLVQTLHSSRGISSFLESVTRRISDHYSPSSS---MKD--DGI 753
Query: 245 TSSIGNFTMDSNTLSAY 295
S+ G+F +SN S++
Sbjct: 754 HSTNGSFVSESNNNSSF 770
>AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical
protein F14D2.7 protein.
Length = 471
Score = 31.1 bits (67), Expect = 0.50
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 347 LSILQQKTAIERITFYVQAHSIQINCEADEFESKNILTFHCPACNISEVDEECLLKHI 520
L L+ KT + +TF + I+ CE DE LT CP C +E+ E L+ HI
Sbjct: 261 LEDLKIKTTQKEVTFCNSCNEIRNRCEEDE------LT-RCPFCGNAELTEGKLMTHI 311
>AC024785-2|AAF60599.2| 467|Caenorhabditis elegans C-type lectin
protein 71 protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.66
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +2
Query: 188 CHYSPSDSGLTSKDTNQSITSSIGN----FTMDSNTLSAYSESLDMIVSYNSFDDSTLSI 355
C Y P+ +T K T T++ N F L AYS + + N+F +S L
Sbjct: 143 CSYDPTVQPVTQKATTPGTTTTAANVNCQFGARQTVLFAYSNDFEPYIVQNTFSNSILYK 202
Query: 356 LQQKTAIER 382
Q AI R
Sbjct: 203 QQVTFAIIR 211
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
protein K11D9.2b protein.
Length = 1004
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 395 VQAHSIQINCEADEFESKNILTFHCPACNISEVD 496
V + +IN A EFES L C CN S VD
Sbjct: 397 VSTNGREINPAAGEFESLTELAMICAMCNDSSVD 430
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
protein K11D9.2a protein.
Length = 1059
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 395 VQAHSIQINCEADEFESKNILTFHCPACNISEVD 496
V + +IN A EFES L C CN S VD
Sbjct: 397 VSTNGREINPAAGEFESLTELAMICAMCNDSSVD 430
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 395 VQAHSIQINCEADEFESKNILTFHCPACNISEVD 496
V + +IN A EFES L C CN S VD
Sbjct: 397 VSTNGREINPAAGEFESLTELAMICAMCNDSSVD 430
>AF025461-6|AAK84545.1| 335|Caenorhabditis elegans Hypothetical
protein M01D1.10 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 323 YNSFDDSTLSILQQKTAIERITFYVQAHSIQINCEADEFESKNILTFHCPACNISEVD 496
Y+ D+ST L + Y AH + I A +F++K+ L N SE++
Sbjct: 68 YDPIDNSTFWFLLNNGNVSASPRYPNAHRVSIVFSASQFDAKSWLKHILYTINPSEIE 125
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 27.9 bits (59), Expect = 4.7
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Frame = +2
Query: 161 SDSSECNCKCHYSPSDSGLTSKDTNQSI-TSSIGNFTMDSNTLSAYSESLDMIVSYNSFD 337
S+ +EC+ C S G+ KD + ++ + T S L+ D + + F
Sbjct: 51 SNLAECSDHCSASLDCQGVEFKDGSCAVFRAGSEKATAGSQLLTKTCVKSDRVCQ-SPFQ 109
Query: 338 DSTLSILQQKTAIERITFYVQAHSIQINCEADEFESKNILTFHCPACNISEVDEECLL 511
+ +Q+ + V A +IQI C A + + F C + VD+EC+L
Sbjct: 110 ---FDLFEQRILVGFAREVVPAANIQI-CMAACLNAFDTFGFECESAMFYPVDQECIL 163
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 27.9 bits (59), Expect = 4.7
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Frame = +2
Query: 161 SDSSECNCKCHYSPSDSGLTSKDTNQSI-TSSIGNFTMDSNTLSAYSESLDMIVSYNSFD 337
S+ +EC+ C S G+ KD + ++ + T S L+ D + + F
Sbjct: 51 SNLAECSDHCSASLDCQGVEFKDGSCAVFRAGSEKATAGSQLLTKTCVKSDRVCQ-SPFQ 109
Query: 338 DSTLSILQQKTAIERITFYVQAHSIQINCEADEFESKNILTFHCPACNISEVDEECLL 511
+ +Q+ + V A +IQI C A + + F C + VD+EC+L
Sbjct: 110 ---FDLFEQRILVGFAREVVPAANIQI-CMAACLNAFDTFGFECESAMFYPVDQECIL 163
>L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical
protein ZK652.6a protein.
Length = 575
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 437 FESKNILTFHCPACNISEVDEECLLKHI 520
++ + I++F CP CNI+ + E H+
Sbjct: 86 YDERKIVSFTCPYCNITGLTERQFGTHV 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,827,730
Number of Sequences: 27780
Number of extensions: 204151
Number of successful extensions: 658
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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