BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320F01f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB73DE Cluster: PREDICTED: similar to bancal CG1... 100 2e-20
UniRef50_Q16EZ6 Cluster: Heterogeneous nuclear ribonucleoprotein... 72 7e-12
UniRef50_UPI000069F051 Cluster: Heterogeneous nuclear ribonucleo... 69 7e-11
UniRef50_Q7KHL0 Cluster: Bancal protein; n=9; Drosophila melanog... 66 3e-10
UniRef50_Q7SYN1 Cluster: Heterogeneous nuclear ribonucleoprotein... 62 6e-09
UniRef50_P61978 Cluster: Heterogeneous nuclear ribonucleoprotein... 62 6e-09
UniRef50_UPI00015B5315 Cluster: PREDICTED: similar to Heterogene... 59 7e-08
UniRef50_Q86EC5 Cluster: Clone ZZD545 mRNA sequence; n=1; Schist... 56 4e-07
UniRef50_Q86E33 Cluster: Clone ZZZ282 mRNA sequence; n=2; Schist... 56 4e-07
UniRef50_P91277 Cluster: Putative uncharacterized protein; n=6; ... 55 9e-07
UniRef50_UPI0000588DF4 Cluster: PREDICTED: hypothetical protein;... 50 2e-05
UniRef50_UPI00005849B8 Cluster: PREDICTED: hypothetical protein;... 49 7e-05
UniRef50_Q7PPG0 Cluster: ENSANGP00000015228; n=1; Anopheles gamb... 49 7e-05
UniRef50_A4V6M2 Cluster: HnRNP K protein; n=1; Dugesia japonica|... 46 4e-04
UniRef50_UPI0000DD807E Cluster: PREDICTED: similar to heterogene... 45 0.001
UniRef50_UPI0000D9D90D Cluster: PREDICTED: similar to heterogene... 45 0.001
UniRef50_A7SGC0 Cluster: Predicted protein; n=2; Nematostella ve... 45 0.001
UniRef50_A2EUG5 Cluster: Putative uncharacterized protein; n=3; ... 33 3.0
UniRef50_A3Z1P8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
>UniRef50_UPI0000DB73DE Cluster: PREDICTED: similar to bancal
CG13425-PC, isoform C; n=2; Endopterygota|Rep:
PREDICTED: similar to bancal CG13425-PC, isoform C -
Apis mellifera
Length = 420
Score = 100 bits (239), Expect = 2e-20
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 GDDGPAQ--KRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPER 383
G GP KR+RQ DDE+ LIPSKVA LRSQYKASI VPDCPGPER
Sbjct: 12 GSGGPTSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPER 71
Query: 384 VLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
VL+I++ D T+++++ +++P L E GSR G E+DVRML+H
Sbjct: 72 VLTISS-DLPTVLQVLNEVVPNLEE----NGSRHGSDEIDVRMLVH 112
>UniRef50_Q16EZ6 Cluster: Heterogeneous nuclear ribonucleoprotein k;
n=1; Aedes aegypti|Rep: Heterogeneous nuclear
ribonucleoprotein k - Aedes aegypti (Yellowfever
mosquito)
Length = 430
Score = 72.1 bits (169), Expect = 7e-12
Identities = 39/103 (37%), Positives = 58/103 (56%)
Frame = +3
Query: 213 DDGPAQKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLS 392
D P KR R+ ++EV LIPSK+A LR++Y+A + V DC GPERVL+
Sbjct: 25 DKKPMNKRSRKDEEEVRLLIPSKMAGAIIGKAGHNIQKLRTEYQAQVNVGDCTGPERVLT 84
Query: 393 ITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
I D ET+ ++KD+M L + G+ E ++R+L+H
Sbjct: 85 I-GGDMETITNVVKDVMKHL--------DKAGENEYELRILVH 118
>UniRef50_UPI000069F051 Cluster: Heterogeneous nuclear
ribonucleoprotein K (hnRNP K) (Transformation
up-regulated nuclear protein) (TUNP).; n=1; Xenopus
tropicalis|Rep: Heterogeneous nuclear ribonucleoprotein
K (hnRNP K) (Transformation up-regulated nuclear
protein) (TUNP). - Xenopus tropicalis
Length = 379
Score = 68.9 bits (161), Expect = 7e-11
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +3
Query: 213 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 386
++ A KR R TD E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 25 EEEQAFKRSRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 84
Query: 387 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
LSI+A D ET+ EI+K I+P L E+ + G+ D + ++R+LIH
Sbjct: 85 LSISA-DIETIGEILKKIIPTLEEYQHFKGN---DFDCELRLLIH 125
>UniRef50_Q7KHL0 Cluster: Bancal protein; n=9; Drosophila
melanogaster|Rep: Bancal protein - Drosophila
melanogaster (Fruit fly)
Length = 508
Score = 66.5 bits (155), Expect = 3e-10
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +3
Query: 192 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 365
MKR+ + +GP QKR+R++++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRSEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 366 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
GPER + I+A+ + TL EII +++ E D++ DVR+LIH
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIH 102
>UniRef50_Q7SYN1 Cluster: Heterogeneous nuclear ribonucleoprotein K;
n=9; Euteleostomi|Rep: Heterogeneous nuclear
ribonucleoprotein K - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 420
Score = 62.5 bits (145), Expect = 6e-09
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +3
Query: 231 KRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSITAE 404
KR R +D+ E+ L+ SK A LR+ Y A+++VPD GPER+LS++A
Sbjct: 34 KRSRNSDEMVELRILLQSKNAGAVIGKGGKDIKALRTDYNATVSVPDSSGPERILSVSA- 92
Query: 405 DDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
D T+ EI+ I+P L E+ + G D + ++R+LIH
Sbjct: 93 DIPTVAEILLKIIPTLEEYQHHKGV---DFDCELRLLIH 128
>UniRef50_P61978 Cluster: Heterogeneous nuclear ribonucleoprotein K;
n=102; Euteleostomi|Rep: Heterogeneous nuclear
ribonucleoprotein K - Homo sapiens (Human)
Length = 463
Score = 62.5 bits (145), Expect = 6e-09
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +3
Query: 213 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 386
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 387 LSITAEDDETLVEIIKDIMPCLAE 458
LSI+A D ET+ EI+K I+P L E
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEE 110
>UniRef50_UPI00015B5315 Cluster: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein K; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein K - Nasonia vitripennis
Length = 445
Score = 58.8 bits (136), Expect = 7e-08
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +3
Query: 336 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 515
QYKASITVPDC GPER+L+I++ D +T++ ++ D++P L E G D +D+RML
Sbjct: 14 QYKASITVPDCYGPERILTISS-DLDTVLTVLGDMVPKLEE---NGVKNGNDIMIDLRML 69
Query: 516 IH 521
+H
Sbjct: 70 VH 71
>UniRef50_Q86EC5 Cluster: Clone ZZD545 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD545 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 265
Score = 56.4 bits (130), Expect = 4e-07
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 192 MKRDAYGD--DGPAQKRHRQTDD----EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASI 353
MKRD G+ DGP K R + D + FLIP + A +RSQY +
Sbjct: 1 MKRDNSGNNQDGPPTKFQRSSVDLTNVSIRFLIPGRAAGIMIGKGGENIKKIRSQYNVKL 60
Query: 354 TVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHN 467
+PD GPER+++I D + + I++D+ P L + N
Sbjct: 61 NIPDSRGPERIMTIEG-DLQAICSIMRDVCPKLKDIMN 97
>UniRef50_Q86E33 Cluster: Clone ZZZ282 mRNA sequence; n=2;
Schistosoma japonicum|Rep: Clone ZZZ282 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 454
Score = 56.4 bits (130), Expect = 4e-07
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 192 MKRDAYGD--DGPAQKRHRQTDD----EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASI 353
MKRD G+ DGP K R + D + FLIP + A +RSQY +
Sbjct: 1 MKRDNSGNNQDGPPTKFQRSSVDLTNVSIRFLIPGRAAGIMIGKGGENIKKIRSQYNVKL 60
Query: 354 TVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHN 467
+PD GPER+++I D + + I++D+ P L + N
Sbjct: 61 NIPDSRGPERIMTIEG-DLQAICSIMRDVCPKLKDIMN 97
>UniRef50_P91277 Cluster: Putative uncharacterized protein; n=6;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 397
Score = 55.2 bits (127), Expect = 9e-07
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Frame = +3
Query: 192 MKRDAYGDDGPAQKRHRQ--TDD----------EVTFLIPSKVAXXXXXXXXXXXXXLRS 335
MKR+ DDG RH++ TD EV L+ SK A LR+
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 336 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 515
++ A + VPD PERV ++TA D++T++ I+KD++P L + ++ +VRML
Sbjct: 78 EFNAHVQVPDSNTPERVCTVTA-DEKTVLNILKDVLPRLEDNFSE------RDPCEVRML 130
Query: 516 IH 521
+H
Sbjct: 131 VH 132
>UniRef50_UPI0000588DF4 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 341
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 EVTF--LIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSITAEDDETLVEI 428
+VTF L+ S A LRS+Y A++ +PD GP+RVL I A E ++I
Sbjct: 8 QVTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNIPDSSGPDRVLQIVANSRENGLDI 67
Query: 429 IKDIMPCLAE 458
IK+++P + E
Sbjct: 68 IKELIPLIRE 77
>UniRef50_UPI00005849B8 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 447
Score = 48.8 bits (111), Expect = 7e-05
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 195 KRDAYGDDGPAQKRHRQTDDEVTF--LIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDC 368
KR A KR R +++ F +I S A LR Y A +++PDC
Sbjct: 14 KRSAEDQRQNQNKRPRGDYNQIIFRLMIRSINAGGVIGKGGENIKRLRVDYDAKVSIPDC 73
Query: 369 PGPERVLSITAEDDETLVEIIKDIMPCLAE 458
GPER++ I + + ++ IKDI+P + E
Sbjct: 74 NGPERIIKIGTRNVDNAIDCIKDIIPSVGE 103
>UniRef50_Q7PPG0 Cluster: ENSANGP00000015228; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000015228 - Anopheles gambiae
str. PEST
Length = 444
Score = 48.8 bits (111), Expect = 7e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 231 KRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSIT 398
KR R + EV LIPSK+A LR++Y+A + V DC GPERV+ ++
Sbjct: 15 KRMRSEEQEVRLLIPSKMAGAIIGKGGHNIQKLRTEYQAQVNVGDCTGPERVVVVS 70
>UniRef50_A4V6M2 Cluster: HnRNP K protein; n=1; Dugesia
japonica|Rep: HnRNP K protein - Dugesia japonica
(Planarian)
Length = 337
Score = 46.4 bits (105), Expect = 4e-04
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Frame = +3
Query: 219 GPAQKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSIT 398
G ++ + Q E+ FLIPSK A LR + A I + D GPER+LS+
Sbjct: 9 GHSRSKKSQPCIELRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDNSGPERILSLE 68
Query: 399 AEDD---ETLVEIIKDIMPCLAEFHNQGGSRMGD--QELDVRMLIH 521
A+ D E L + ++ + C+ G D +D+RML++
Sbjct: 69 ADLDTILEILTQCLEKMEGCI-PLPRAGSGDCNDSINHVDLRMLVN 113
>UniRef50_UPI0000DD807E Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein K; n=1; Homo sapiens|Rep:
PREDICTED: similar to heterogeneous nuclear
ribonucleoprotein K - Homo sapiens
Length = 426
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +3
Query: 339 YKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 518
Y+A + P+ GP+ +LSI+A D ET+ E +K I+P L E+H+ GS + ++R+L
Sbjct: 292 YRARVLAPEGNGPKCMLSISA-DIETVGETLKKIIPTLEEYHHYKGSNF---DCELRLLT 347
Query: 519 H 521
H
Sbjct: 348 H 348
>UniRef50_UPI0000D9D90D Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein K; n=1; Macaca mulatta|Rep:
PREDICTED: similar to heterogeneous nuclear
ribonucleoprotein K - Macaca mulatta
Length = 329
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +3
Query: 333 SQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRM 512
+ Y A + P+ GP+ +LSI+A+ D T+ EI K I+P L E+H+ GS + ++R+
Sbjct: 193 TDYSAGVLAPEGSGPKCMLSISADID-TIGEIWKKIIPTLEEYHHYKGSNF---DCELRL 248
Query: 513 LIH 521
L H
Sbjct: 249 LTH 251
>UniRef50_A7SGC0 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 419
Score = 44.8 bits (101), Expect = 0.001
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Frame = +3
Query: 183 GIKMKRDAYGDDGPAQKRHRQTDD-------EVTFLIPSKVAXXXXXXXXXXXXXLRSQY 341
G +KR A GD KR R++ D + LI SK A LR++Y
Sbjct: 23 GGSLKRPADGDYNGNVKRMRESSDVDSNAPTTLRILIQSKDAGGIIGKGGTNIRRLRTEY 82
Query: 342 KASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAE 458
A + VPD ERVL+ITA L +I+ +++P + E
Sbjct: 83 NAVVNVPDTNSNERVLTITAPRQSAL-DILAEVVPKIGE 120
>UniRef50_A2EUG5 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1548
Score = 33.5 bits (73), Expect = 3.0
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 327 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPC 449
+ SQ++A + + +CP E +L +++ + E +I+KDI C
Sbjct: 1507 VESQHQAVVRISECPKDETILKLSSTNLEESNKILKDIAKC 1547
>UniRef50_A3Z1P8 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 5701|Rep: Putative uncharacterized
protein - Synechococcus sp. WH 5701
Length = 904
Score = 31.9 bits (69), Expect = 9.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 284 GWVDNRKRWQQYIKAQKPVQSLYNSP 361
GW+ K W QY PVQS+Y++P
Sbjct: 174 GWLYGGKAWCQYFCPMAPVQSVYSTP 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,446,358
Number of Sequences: 1657284
Number of extensions: 9967048
Number of successful extensions: 23379
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23366
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -