Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320F01f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3035|AAM68389.2| 502|Drosophila melanogaster CG13425-P... 68 9e-12
AF275629-1|AAF78762.1| 508|Drosophila melanogaster bancal prote... 66 2e-11
AJ238947-1|CAB64936.1| 496|Drosophila melanogaster heterogeneou... 66 3e-11
AF142631-1|AAF00596.1| 490|Drosophila melanogaster hnRNP K prot... 66 3e-11
AE013599-3036|AAF57450.2| 496|Drosophila melanogaster CG13425-P... 66 3e-11
X96601-1|CAA65421.1| 962|Drosophila melanogaster vinculin protein. 31 0.72
AY128501-1|AAM75094.1| 961|Drosophila melanogaster SD03117p pro... 31 0.72
AL009193-4|CAA15691.1| 961|Drosophila melanogaster EG:103B4.1,F... 31 0.72
AE014298-363|AAF45752.1| 961|Drosophila melanogaster CG3299-PA ... 31 0.72
X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like ... 28 6.7
AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz prote... 28 6.7
AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz produ... 28 6.7
AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB... 28 6.7
>AE013599-3035|AAM68389.2| 502|Drosophila melanogaster CG13425-PC,
isoform C protein.
Length = 502
Score = 67.7 bits (158), Expect = 9e-12
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Frame = +3
Query: 186 IKMKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITV 359
++MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V
Sbjct: 5 LRMKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV 64
Query: 360 PDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
D GPER + I+A+ + TL EII +++ E D++ DVR+LIH
Sbjct: 65 DDSQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIH 108
>AF275629-1|AAF78762.1| 508|Drosophila melanogaster bancal protein
protein.
Length = 508
Score = 66.5 bits (155), Expect = 2e-11
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +3
Query: 192 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 365
MKR+ + +GP QKR+R++++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRSEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 366 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
GPER + I+A+ + TL EII +++ E D++ DVR+LIH
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIH 102
>AJ238947-1|CAB64936.1| 496|Drosophila melanogaster heterogeneous
nuclear ribonucleoprotein(hnRNP) protein.
Length = 496
Score = 66.1 bits (154), Expect = 3e-11
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = +3
Query: 192 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 365
MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 366 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
GPER + I+A+ + TL EII +++ E D++ DVR+LIH
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIH 102
>AF142631-1|AAF00596.1| 490|Drosophila melanogaster hnRNP K protein
homolog protein.
Length = 490
Score = 66.1 bits (154), Expect = 3e-11
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = +3
Query: 192 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 365
MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 366 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
GPER + I+A+ + TL EII +++ E D++ DVR+LIH
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIH 102
>AE013599-3036|AAF57450.2| 496|Drosophila melanogaster CG13425-PA,
isoform A protein.
Length = 496
Score = 66.1 bits (154), Expect = 3e-11
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = +3
Query: 192 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 365
MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 366 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 521
GPER + I+A+ + TL EII +++ E D++ DVR+LIH
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIH 102
>X96601-1|CAA65421.1| 962|Drosophila melanogaster vinculin protein.
Length = 962
Score = 31.5 bits (68), Expect = 0.72
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 411 ETLVEIIKDIMPCLAEFHNQGGSR 482
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>AY128501-1|AAM75094.1| 961|Drosophila melanogaster SD03117p
protein.
Length = 961
Score = 31.5 bits (68), Expect = 0.72
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 411 ETLVEIIKDIMPCLAEFHNQGGSR 482
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>AL009193-4|CAA15691.1| 961|Drosophila melanogaster
EG:103B4.1,FBgn0004397;Vinc protein.
Length = 961
Score = 31.5 bits (68), Expect = 0.72
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 411 ETLVEIIKDIMPCLAEFHNQGGSR 482
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>AE014298-363|AAF45752.1| 961|Drosophila melanogaster CG3299-PA
protein.
Length = 961
Score = 31.5 bits (68), Expect = 0.72
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 411 ETLVEIIKDIMPCLAEFHNQGGSR 482
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like
protein protein.
Length = 2515
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 284 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 382
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1531 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1563
>AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz protein
protein.
Length = 2731
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 284 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 382
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1747 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1779
>AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz product
protein.
Length = 2731
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 284 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 382
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1747 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1779
>AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB
protein.
Length = 2731
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 284 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 382
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1747 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1779
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,794,444
Number of Sequences: 53049
Number of extensions: 456406
Number of successful extensions: 1018
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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