Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320E12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 111 4e-25
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 107 4e-24
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 95 4e-20
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 93 1e-19
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 36 0.015
09_04_0266 + 16240162-16242075 33 0.18
03_05_0167 - 21448714-21448846,21449748-21449870,21450024-214503... 31 0.74
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 29 1.7
02_03_0267 - 17081551-17082636,17084935-17085252 29 1.7
11_01_0649 - 5259038-5259195,5259824-5259887,5260446-5260512,526... 29 2.3
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 29 2.3
01_06_1572 + 38319544-38319849,38320427-38320513,38320584-383206... 29 3.0
01_06_1328 + 36347963-36347984,36348609-36348764,36349083-363492... 29 3.0
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873... 29 3.0
11_01_0455 + 3517281-3519798,3519888-3520261 28 4.0
10_08_0085 + 14725531-14726622 28 5.2
05_01_0609 + 5443780-5443875,5444540-5445136,5448792-5448881,544... 28 5.2
02_05_0590 + 30177711-30178133,30178761-30179120,30179576-30180004 28 5.2
11_02_0007 + 7283080-7283918,7284526-7285764,7286317-7286376,728... 27 6.9
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 27 6.9
07_03_0544 + 19309026-19310105 27 6.9
07_03_0364 - 17281356-17281820 27 6.9
07_01_0209 + 1544347-1544796 27 6.9
03_05_0424 + 24107009-24107138,24107381-24107784 27 6.9
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 27 6.9
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 27 6.9
08_01_0575 + 5107383-5107421,5107514-5107615,5107764-5107964,510... 27 9.1
05_03_0416 + 13684604-13688050 27 9.1
02_05_0073 - 25602268-25603182,25603273-25604190 27 9.1
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 111 bits (266), Expect = 4e-25
Identities = 57/169 (33%), Positives = 99/169 (58%), Gaps = 13/169 (7%)
Frame = +3
Query: 3 SNVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSC 182
SN+ AGT QIQ IDS ++ P+ +L H + +KEA WAI+N GGT Q++ ++S
Sbjct: 352 SNITAGTKEQIQAVIDSNIIAPLLHLLQHAEFDVKKEAVWAISNATSGGTFNQIEYLVSQ 411
Query: 183 DILSPYCALLQARDHRAIIVVLDGLTHLLQAAAKYDQVRGMC------IKLEEIGALDQI 344
+ P C LL +D + ++ L+ L ++L+ + G C ++E LD+I
Sbjct: 412 GCIKPLCDLLVHQDSKTVLTCLEALDNILRVGEAKKNL-GACNMNIFVPMVDEADGLDKI 470
Query: 345 ENLQQHENEQIYKKSIHILDSYFMEEED-------ASTQPAHDHEQYQF 470
E+LQ H+N +IY K++++L+SY+++E+D + ++ D+E +QF
Sbjct: 471 EDLQNHDNVEIYNKAVYVLESYWVQEDDQQPFLIPSVSESESDNEMFQF 519
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 27 PQIQRAIDSGVLEPIARVLVHHDI-KCQKEAAWAITNLCLG 146
P I I SGVL L + + Q EAAWA+TN+ G
Sbjct: 109 PPIDEVIRSGVLPRFVEFLTREEYPQLQFEAAWALTNIASG 149
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 107 bits (258), Expect = 4e-24
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 9/174 (5%)
Frame = +3
Query: 3 SNVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSC 182
SN+ AG QIQ I++G++ P+ +L + +KEAAWAI+N GG+ +Q+ ++S
Sbjct: 352 SNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSE 411
Query: 183 DILSPYCALLQARDHRAIIVVLDGLTHLLQA-----AAKYDQVRGMCIKLEEIGALDQIE 347
+ P C LL D R + V L+GL ++L+ V ++E L++IE
Sbjct: 412 GCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIE 471
Query: 348 NLQQHENEQIYKKSIHILDSYFMEEED----ASTQPAHDHEQYQFRTNDAAIHF 497
NLQ H+N +IY+K++ IL++Y+M+EED A+T A + F A F
Sbjct: 472 NLQSHDNNEIYEKAVKILEAYWMDEEDDTMGATTVAAPQGATFDFGQGGGAAQF 525
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 6 NVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKC-QKEAAWAITNLCLGGTPEQLDAMLSC 182
N+ G Q Q ID L + +L + K +KEA W I+N+ G +Q+ A+++
Sbjct: 310 NIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNI-TAGNKDQIQAVINA 368
Query: 183 DILSPYCALLQARD 224
I+ P LLQ +
Sbjct: 369 GIIGPLVNLLQTAE 382
Score = 35.9 bits (79), Expect = 0.020
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 24 APQIQRAIDSGVLEPIARVLVHHDI-KCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPY 200
+P I+ I SGV+ + L D + Q EAAWA+TN+ GT E ++ + +
Sbjct: 105 SPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIA-SGTSENTKVVIDHGAVPIF 163
Query: 201 CALL 212
LL
Sbjct: 164 VKLL 167
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 3 SNVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSC 182
+N+ +GT+ + ID G + ++L +++A WA+ N+ G +P+ D +L+
Sbjct: 141 TNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVA-GDSPKCRDLVLAN 199
Query: 183 DILSPYCALL 212
L P A L
Sbjct: 200 GALLPLLAQL 209
Score = 29.5 bits (63), Expect = 1.7
Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Frame = +3
Query: 15 AGTAPQIQRAI-DSGVLEPI-ARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSCDI 188
AG +P+ + + +G L P+ A++ H + + A W ++N C G + +
Sbjct: 186 AGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQ--TRPA 243
Query: 189 LSPYCALLQARDHRAIIVVLDGLTHLLQAAAKYDQVRGMCIKLEEIGALDQIENLQQHEN 368
L L+ + D + L++L + D+++ + E G ++ L H +
Sbjct: 244 LPALARLIHSNDEEVLTDACWALSYL--SDGTNDKIQAVI----EAGVCPRLVELLLHPS 297
Query: 369 EQIYKKSIHILDSYFMEEEDASTQPAHDHE 458
+ ++ + + + +DA TQ DH+
Sbjct: 298 PSVLIPALRTVGN-IVTGDDAQTQCIIDHQ 326
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 94.7 bits (225), Expect = 4e-20
Identities = 56/171 (32%), Positives = 96/171 (56%), Gaps = 9/171 (5%)
Frame = +3
Query: 3 SNVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSC 182
SN+ G+ IQ ID+ V+ P+ +L + ++EAAWAI+N GG+ +Q+ ++S
Sbjct: 388 SNISTGSKDNIQAVIDADVISPLIFLLKTSEKDIKEEAAWAISNAASGGSNDQIQYLVSR 447
Query: 183 DILSPYCALLQARDHRAIIVVLDGLTHLLQAAAKYDQVRGMCIK-----LEEIGALDQIE 347
L P C +L +D + L+GL ++LQA A Q +G + + E G LD++E
Sbjct: 448 GCLEPLCNVLTYQDADLVYACLEGLQNILQAGAVGKQGQGSTVNPYAQFILECGGLDKLE 507
Query: 348 NLQQHENEQIYKKSIHILDSYFMEE---EDASTQPAHDH-EQYQFRTNDAA 488
+LQ+ +N+ IYK + +L+ Y+ EE +D + ++D E + + DAA
Sbjct: 508 DLQEVDNDAIYKLVMKLLEGYWDEEVSDDDPNLPTSNDSAETVETASEDAA 558
Score = 34.3 bits (75), Expect = 0.060
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Frame = +3
Query: 6 NVFAGTAPQIQRAIDSGVLEPI-ARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSC 182
N+ A + +D G + P+ A+ + + A WA++NLC G P ++
Sbjct: 221 NIAADVPTCREIVLDHGAVTPLLAQFREGMKVPVLRTATWALSNLCFGKLPAEVQVKPIL 280
Query: 183 DILSPYCALLQARDHRAIIVVLDGLTHLLQAAAKYDQVRGMCIKLEEIGALDQIENLQQH 362
DI+S L+ + D + + L ++ + D ++ + + GA Q+ NL H
Sbjct: 281 DIIS---QLIHSVDEKILGDACWALCYICDGVS--DGIQHVL----DAGACPQLVNLLMH 331
Query: 363 ENEQIYKKSIHILDSYFMEEEDASTQ 440
+ I I +L + +DA Q
Sbjct: 332 ASANILLPVITVL-ARISSGDDAQVQ 356
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 93.1 bits (221), Expect = 1e-19
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 22/178 (12%)
Frame = +3
Query: 3 SNVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDA---- 170
SN+ AG QIQ I++ ++ P+ +L + +KEAAWAI+N GGT +Q+
Sbjct: 358 SNITAGNREQIQAVINANIIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKIFHCH 417
Query: 171 -------------MLSCDILSPYCALLQARDHRAIIVVLDGLTHLLQA--AAKY---DQV 296
+++ + P C LL D R + V L+GL ++L+ A K V
Sbjct: 418 YGLLTTYEMSTRYLVAQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGAGDV 477
Query: 297 RGMCIKLEEIGALDQIENLQQHENEQIYKKSIHILDSYFMEEEDASTQPAHDHEQYQF 470
+++ L++IENLQ H+N +IY+K++ +L+SY++EEED P+ D+ Q F
Sbjct: 478 NSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEED-DAMPSGDNAQNGF 534
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 6 NVFAGTAPQIQRAIDSGVLEPIARVLVH-HDIKCQKEAAWAITNLCLGGTPEQLDAMLSC 182
N+ G Q Q ID L + +L + H +KEA W I+N+ G EQ+ A+++
Sbjct: 316 NIVTGDDMQTQCVIDHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNR-EQIQAVINA 374
Query: 183 DILSPYCALLQARD 224
+I++P LLQ +
Sbjct: 375 NIIAPLVHLLQTAE 388
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/89 (25%), Positives = 45/89 (50%)
Frame = +3
Query: 3 SNVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSC 182
+N+ +GT+ + ++SG + ++L +++A WA+ N+ G +P+ D +L+
Sbjct: 147 TNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQAVWALGNVA-GDSPKCRDLVLAS 205
Query: 183 DILSPYCALLQARDHRAIIVVLDGLTHLL 269
L P LLQ + A + +L T L
Sbjct: 206 GGLYP---LLQQLNEHAKLSMLRNATWTL 231
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 24 APQIQRAIDSGVLEPIARVLVHHDI-KCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPY 200
+P I+ I++GV+ L D + Q EAAWA+TN+ GT + ++ + +
Sbjct: 111 SPPIEEVINTGVVPRFIAFLQREDYPQLQFEAAWALTNIA-SGTSDNTKVVVESGAVPIF 169
Query: 201 CALLQA 218
LL +
Sbjct: 170 VKLLSS 175
Score = 31.1 bits (67), Expect = 0.56
Identities = 30/150 (20%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Frame = +3
Query: 15 AGTAPQIQRAI-DSGVLEPIARVLVHH-DIKCQKEAAWAITNLCLGGTPEQLDAMLSCDI 188
AG +P+ + + SG L P+ + L H + + A W ++N C G + +
Sbjct: 192 AGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPNFEQVKPA-- 249
Query: 189 LSPYCALLQARDHRAIIVVLDGLTHLLQAAAKYDQVRGMCIKLEEIGALDQIENLQQHEN 368
LS L+ ++D + L++L + D+++ + E G ++ L H +
Sbjct: 250 LSALQRLIHSQDEEVLTDACWALSYL--SDGTNDKIQAVI----ESGVFPRLVELLMHPS 303
Query: 369 EQIYKKSIHILDSYFMEEEDASTQPAHDHE 458
+ ++ + + + +D TQ DH+
Sbjct: 304 ASVLIPALRTVGN-IVTGDDMQTQCVIDHQ 332
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 36.3 bits (80), Expect = 0.015
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Frame = +3
Query: 3 SNVFAGTAPQIQRAIDSGVLEPIARVLVHHDIKCQKEAAWAITNLCLGGTP--------- 155
SN+ AG+ + S + R++ ++EAA+ + NLC+ T
Sbjct: 355 SNIAAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAAYTLGNLCVVPTGNCELPKIIV 414
Query: 156 EQLDAMLSCDILSPYCALLQARDHRAIIVVLDGLTHLLQAAAKYDQVRGMCIKLEEIGAL 335
E L A++ L + L+++ D + GL L Y +G + E G +
Sbjct: 415 EHLVAIVDGGALPGFIHLVRSAD---VDTAGLGLQFLELVMRGYPNKQGPKLVEMEDG-I 470
Query: 336 DQIENLQQHENEQIYKKSIHILDSYFMEE 422
+ +E Q HENEQ+ + ++D YF E+
Sbjct: 471 EAMERFQFHENEQMRNMANGLVDEYFGED 499
>09_04_0266 + 16240162-16242075
Length = 637
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -3
Query: 249 PALR*WLGDPW----PGAGRSTATEYHRTAWRPVVQGCLQDTGL 130
P LR +GD + G R AT Y RTAW ++ CL+D GL
Sbjct: 485 PELRGLIGDEYLKQLTGKFRLAATRYQRTAWLKIL-NCLRDEGL 527
>03_05_0167 - 21448714-21448846,21449748-21449870,21450024-21450302,
21450389-21450672,21450737-21450964,21452937-21453110,
21453198-21453732,21453779-21453840,21453908-21454231,
21454664-21455093,21457033-21457268,21457355-21457414,
21457495-21457628,21457884-21458010,21458239-21458337,
21458414-21458513,21458601-21458671,21459101-21459172,
21459656-21459787,21460512-21460670
Length = 1253
Score = 30.7 bits (66), Expect = 0.74
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = -2
Query: 316 NFMHIPLT*SYFAAACNR*VSPSSTTMMAR*SLAWSRAQYGDRISQDSMASSCSGVPPRH 137
++ IPLT A A + SS AR L S YG +MA +C G+
Sbjct: 1050 DYKRIPLTREREALASDVDAIQSSVDENARYYLFISHTGYGGVAY--AMAITCLGLGADE 1107
Query: 136 RFVMAQAASFWHLMS*CTRTLAIGSSTPLSI 44
+F+M Q A + + T++++I +S +++
Sbjct: 1108 KFIMEQTAETHFISTSLTKSVSIKTSADIAL 1138
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 412 LWRRRTPARSPLTTTSSISS 471
LWRRR+ +SP T SS+SS
Sbjct: 7 LWRRRSTEKSPAETESSVSS 26
>02_03_0267 - 17081551-17082636,17084935-17085252
Length = 467
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 48 DSGVLEPIARVLVHHDIKCQKEAAWAITNLC 140
+SG + P+ +L H + +K+AA AI +LC
Sbjct: 303 ESGAMRPLVDLLEHGSMTAKKDAASAIFSLC 333
>11_01_0649 -
5259038-5259195,5259824-5259887,5260446-5260512,
5260534-5260607,5260725-5261510,5262623-5262685
Length = 403
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 186 ILSPYCALLQARDHRAII--VVLDGLTHLLQAAAKYDQ-VRGMCIKLEEIGALDQIENLQ 356
+L+ YCAL +H ++ ++L + L ++Y + M + I + +IE L+
Sbjct: 303 LLNEYCALSCILEHALVLENLILQIYSKLYICESRYCHLIARMPFSMYAIFSCKEIEILE 362
Query: 357 QHENEQIYKKSIHILDSYFMEEEDASTQPAHDHEQ 461
++N+Q + +S+ E+ED+ P + ++
Sbjct: 363 GYDNDQDEVEEDEDENSHEDEDEDSFGDPYEEEDE 397
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 242 YDDGSVIPGLEQ-GAVRRQNITGQHGVQLFRGASKTQVCNGPGRFL 108
+ +G + G E G +RR G+ G + RGA+ + +G GRFL
Sbjct: 107 FGEGEALAGAEDPGRIRRLRRPGRLGHEDARGAAGPNMRHGHGRFL 152
>01_06_1572 +
38319544-38319849,38320427-38320513,38320584-38320676,
38321491-38321567,38321974-38322562,38322701-38322794,
38322884-38322996,38323438-38323524,38323842-38323964,
38324058-38324192,38324437-38324484,38324993-38325094,
38325321-38325716
Length = 749
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 439 SPLTTTSSISSGQMMQPYTSR 501
S + TT ++ SGQ+MQP TSR
Sbjct: 370 SGMATTGALYSGQVMQPITSR 390
>01_06_1328 +
36347963-36347984,36348609-36348764,36349083-36349261,
36349347-36349442,36349525-36349594,36349635-36349705,
36350654-36351286
Length = 408
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 205 AQYGDRISQDSMASSCSGVPPRHR 134
++ G R+SQ+ MA+SC+ P R+R
Sbjct: 254 SKLGIRVSQEVMANSCTNTPRRNR 277
>01_05_0553 +
23185473-23186188,23187096-23187101,23187230-23187374,
23187887-23188159,23188275-23188338,23188479-23188744,
23188951-23189045,23189544-23189718,23190669-23191063,
23191830-23191953,23192864-23192959,23193049-23193120,
23194687-23194824,23195369-23195549,23195602-23195963,
23196944-23197386,23197461-23197763,23197857-23198081,
23198260-23198350,23198702-23198779,23198939-23199229,
23199316-23199513,23199681-23200163,23200488-23200562,
23201163-23201324,23201400-23201729,23201816-23201916,
23202477-23202581,23202931-23203162,23203913-23204257,
23204346-23204447,23206010-23206153,23206463-23206551,
23206979-23207061,23207172-23207287,23207824-23207909,
23208461-23208560,23209270-23209335
Length = 2451
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -1
Query: 218 GLEQGAVRRQNITGQHGVQLFRGASKTQVCNGPGRFLLALDVMMHQDPSDWLQ 60
G E+ AV ++++TG GV L + +C+G R +ALD + D WL+
Sbjct: 146 GAEEVAVSQEDLTGLWGVFLDKAELFDALCSGVSR-QVALDSGLGTDVLLWLR 197
>11_01_0455 + 3517281-3519798,3519888-3520261
Length = 963
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 57 VLEPIARVLVHHDIKCQKEAAWAITNLCLGGTPEQLDAMLSCDILSPYCALLQARDHRAI 236
+L+ + VL+ ++ C KE+ A+ + G L+ L C SPY + D R +
Sbjct: 892 ILDIVDPVLLQDELDCSKESPVAMKEIFSEGLHSVLNIGLCCTKQSPY----ERMDMREV 947
Query: 237 IVVLDGLTHLLQAAAK 284
L G + A +
Sbjct: 948 AAKLHGTRRHISEATR 963
>10_08_0085 + 14725531-14726622
Length = 363
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 175 SMASSCSGVPPRHRFVMAQAASFWHLMS 92
S A++C G PP ++A A+ +HL+S
Sbjct: 2 SPAAACRGNPPSRSAIVADTATGYHLLS 29
>05_01_0609 +
5443780-5443875,5444540-5445136,5448792-5448881,
5449615-5450121
Length = 429
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +1
Query: 1 AATCSREQHHRYRELSTAGCWSQSLGSWCIMTSSARRKRP----GPLQT 135
++ C E HR R STA + +LGS C+ + A R+RP GPL++
Sbjct: 132 SSDCLLELQHR-RLPSTAPPLTPTLGSICMASRCALRRRPHSVAGPLRS 179
>02_05_0590 + 30177711-30178133,30178761-30179120,30179576-30180004
Length = 403
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 318 EEIGALDQIENLQQHENEQIYKKSIHILDSYFMEEEDASTQPAHDH 455
E++ D ++ Q E+ + KK I E EDAST+PA DH
Sbjct: 329 EDVDDDDVVDEELQEEDTDMAKKKQCIRHENG-EAEDASTRPAEDH 373
>11_02_0007 +
7283080-7283918,7284526-7285764,7286317-7286376,
7287469-7287610
Length = 759
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -2
Query: 253 PSSTTMMAR*SLAWSRAQYGDRISQDSMASS 161
PSS T + R S+ W++ QY ISQ+SM S
Sbjct: 529 PSSKTRIRRLSI-WNKQQYPTFISQESMKLS 558
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 321 EIGALDQIENLQQHENEQIYKKSIHILDSYFMEEEDASTQ 440
E+ ALDQ +QQ E EQ +K + + F EE+D Q
Sbjct: 304 ELEALDQKVKMQQEELEQ-KQKELKSFNLTFQEEQDKRMQ 342
>07_03_0544 + 19309026-19310105
Length = 359
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 233 GSVIPGLEQGAVRRQNITGQH 171
GS++PGLE+ V+ + TG H
Sbjct: 250 GSIVPGLEELQVKAEATTGDH 270
>07_03_0364 - 17281356-17281820
Length = 154
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +2
Query: 134 PVSWRH---P*TTGRHAVL*YSVAVLRPAPGQGSPSHHRS 244
P+ RH P T HA+L + +A P + P HHRS
Sbjct: 64 PLRRRHQQLPPATAGHALLDFVLATSADHPSRPKPCHHRS 103
>07_01_0209 + 1544347-1544796
Length = 149
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 104 PEGSGLGHYKPVSWR 148
PEGS GHY V WR
Sbjct: 99 PEGSSCGHYTQVVWR 113
>03_05_0424 + 24107009-24107138,24107381-24107784
Length = 177
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 403 TPTLWRRRTPARSPLTTTSSISSGQMMQP 489
+PT R R P+R P TTT++ SS P
Sbjct: 121 SPTQCRHRRPSRPPETTTATPSSRPASSP 149
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 321 EIGALDQIENLQQHENEQIYKKSIHILDSYFMEEEDASTQ 440
E+ ALDQ +QQ E EQ +K + + F EE+D Q
Sbjct: 525 ELEALDQKVKMQQEELEQ-KQKELKSFNLTFQEEQDKRLQ 563
>01_07_0046 -
40714701-40714763,40715266-40715343,40716398-40716462,
40717075-40717201,40717279-40717319,40717621-40717690,
40718070-40718191,40719047-40719107,40719182-40719292,
40719387-40719461,40719815-40719842,40719929-40719978,
40720228-40720290,40720385-40720426,40720562-40720631,
40720663-40720713,40721857-40722041,40722374-40722775
Length = 567
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 209 APGQGSPSHHRSAGWTHSSIAGCG 280
+PG SPSHHRS+ + ++ A G
Sbjct: 24 SPGGVSPSHHRSSSTSSAASAAAG 47
>08_01_0575 +
5107383-5107421,5107514-5107615,5107764-5107964,
5108120-5108294,5108454-5108920,5109439-5109822
Length = 455
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 58 CWSQSLGSWCIMTSSARRKRPGPLQTC 138
C + S G+W ++ S RP P+Q C
Sbjct: 70 CKNNSDGTWAVVDVSLDSLRPSPVQKC 96
>05_03_0416 + 13684604-13688050
Length = 1148
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 164 QLFRGASKTQVCNGPGRFLLALDVMMHQDPSDWLQ 60
Q+ R SK CN +FLL LD H D +W Q
Sbjct: 147 QMVREISKQLCCN---KFLLVLDDAWHTDGYEWGQ 178
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 194 AVLRPAPGQGSPSHHRSAGWTHSSIAGCGEIRSS 295
AV RP+P +GSP RS SS G G R+S
Sbjct: 154 AVSRPSPHRGSPQRKRSGSRERSS--GGGSRRAS 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,774,630
Number of Sequences: 37544
Number of extensions: 361947
Number of successful extensions: 1142
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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