Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320E10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77661-8|CAB01189.1|  438|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    28   4.7  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     28   4.7  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     28   4.7  
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U42437-3|AAA83495.1|  297|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for...    27   6.2  
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for...    27   6.2  
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei...    27   6.2  
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei...    27   6.2  
AF164625-1|AAD47816.1|  944|Caenorhabditis elegans tandem-array-...    27   8.1  
AF022974-6|AAC48041.1|  944|Caenorhabditis elegans Tandem array ...    27   8.1  

>Z77661-8|CAB01189.1|  438|Caenorhabditis elegans Hypothetical
           protein F40G12.10 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +2

Query: 338 TIDRKRATSLPRRGPKSQSSETRAHSFPSSTLLSDPR 448
           ++ ++R + L RR  KS+S+  +  + P+S L +DP+
Sbjct: 28  SMSKERGSELSRRPQKSRSNSKQKATGPTSALPTDPK 64


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 281 TLVARDG*FGRDPACLS*STIDRKRATSLPRRGPK-SQSSETR-AHSFPSSTLLSDPRGG 454
           T    DG  G D +  + + +   +A S PRRG + ++SS+TR A   P+ T  S+ +  
Sbjct: 429 TCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT--SEKKKE 486

Query: 455 ARYPIRPIVSRITI 496
           +R   +PI++ + +
Sbjct: 487 SRELQKPIIATVQV 500


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 281 TLVARDG*FGRDPACLS*STIDRKRATSLPRRGPK-SQSSETR-AHSFPSSTLLSDPRGG 454
           T    DG  G D +  + + +   +A S PRRG + ++SS+TR A   P+ T  S+ +  
Sbjct: 371 TCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT--SEKKKE 428

Query: 455 ARYPIRPIVSRITI 496
           +R   +PI++ + +
Sbjct: 429 SRELQKPIIATVQV 442


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 281 TLVARDG*FGRDPACLS*STIDRKRATSLPRRGPK-SQSSETR-AHSFPSSTLLSDPRGG 454
           T    DG  G D +  + + +   +A S PRRG + ++SS+TR A   P+ T  S+ +  
Sbjct: 553 TCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT--SEKKKE 610

Query: 455 ARYPIRPIVSRITI 496
           +R   +PI++ + +
Sbjct: 611 SRELQKPIIATVQV 624


>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
            F54D1.6 protein.
          Length = 1423

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 383  KSQSSETRAHSFPSSTLLSDPRGGARYPI 469
            K +++E R +   S + ++  RGG +YPI
Sbjct: 1351 KGEAAERRGYDMASRSSMTGSRGGKKYPI 1379


>U42437-3|AAA83495.1|  297|Caenorhabditis elegans Hypothetical
           protein F30B5.6 protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 107 YKIISINN*GSKPLLCFA*T---LLILVDRYLSYIYKNNVI 220
           Y  IS +N   K LLC       LLI  D+Y+ + Y NNVI
Sbjct: 111 YFQISYHNNSHKTLLCAISVNLCLLIFFDQYMMFGYCNNVI 151


>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
            protein.
          Length = 4280

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -1

Query: 443  DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLY-FSSSKLDLAQT 303
            DL V W+ E +G G   +      E   W  YGQL  +    ++  QT
Sbjct: 917  DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964


>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
            protein.
          Length = 4450

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -1

Query: 443  DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLY-FSSSKLDLAQT 303
            DL V W+ E +G G   +      E   W  YGQL  +    ++  QT
Sbjct: 917  DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964


>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
            805, isoform b protein.
          Length = 4450

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -1

Query: 443  DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLY-FSSSKLDLAQT 303
            DL V W+ E +G G   +      E   W  YGQL  +    ++  QT
Sbjct: 917  DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964


>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
            805, isoform a protein.
          Length = 4280

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -1

Query: 443  DLKVVWRKEMNGPGFLSFVTLDPVEEGMWHAYGQLY-FSSSKLDLAQT 303
            DL V W+ E +G G   +      E   W  YGQL  +    ++  QT
Sbjct: 917  DLIVKWKSEGDGRGVYGYHVQFRNENSGWKTYGQLVPYVRDNMEYTQT 964


>AF164625-1|AAD47816.1|  944|Caenorhabditis elegans
           tandem-array-modifier protein protein.
          Length = 944

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 365 LPRRGPKSQSSETRAHSFPSSTLLSDPRGGARYPIRPIVSRI 490
           LPRRGP+++++E +       TL+        Y ++ IV ++
Sbjct: 116 LPRRGPEARATEIKCPECRKPTLVPADGLPVNYRVQEIVQKV 157


>AF022974-6|AAC48041.1|  944|Caenorhabditis elegans Tandem array
           expression modifierprotein 1 protein.
          Length = 944

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 365 LPRRGPKSQSSETRAHSFPSSTLLSDPRGGARYPIRPIVSRI 490
           LPRRGP+++++E +       TL+        Y ++ IV ++
Sbjct: 116 LPRRGPEARATEIKCPECRKPTLVPADGLPVNYRVQEIVQKV 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,924,635
Number of Sequences: 27780
Number of extensions: 232095
Number of successful extensions: 586
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)