Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320E04f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015634-1|AAH15634.2|  365|Homo sapiens COQ3 protein protein.         67   3e-11
BC063463-1|AAH63463.1|  369|Homo sapiens coenzyme Q3 homolog, me...    67   4e-11
AL513550-3|CAI17193.1|  369|Homo sapiens coenzyme Q3 homolog, me...    67   4e-11
AF193016-1|AAF66826.1|  310|Homo sapiens methyltransferase COQ3 ...    67   4e-11

>BC015634-1|AAH15634.2|  365|Homo sapiens COQ3 protein protein.
          Length = 365

 Score = 67.3 bits (157), Expect = 3e-11
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +2

Query: 233 YATANLYSKDENHGRTTLDSSEIKMFSKQMSEWWDVNGYLKSLHAMNKVRIPLIRDGLIQ 412
           Y  A LYS  +    TT+DS E+K F     +WWD  G    LH+MN +R+P IRD L++
Sbjct: 75  YPWARLYSTSQ----TTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLE 130

Query: 413 T--SERTLTPLQDKKILDVGLWG 475
           T  + +   PL   KILDVG  G
Sbjct: 131 TIPNHQPGKPLLGMKILDVGCGG 153



 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 468 CGGGILAEGLARLGANV 518
           CGGG+L E L RLGA+V
Sbjct: 151 CGGGLLTEPLGRLGASV 167


>BC063463-1|AAH63463.1|  369|Homo sapiens coenzyme Q3 homolog,
           methyltransferase (S. cerevisiae) protein.
          Length = 369

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +2

Query: 233 YATANLYSKDENHGRTTLDSSEIKMFSKQMSEWWDVNGYLKSLHAMNKVRIPLIRDGLIQ 412
           Y  A LYS  +    TT+DS E+K F     +WWD  G    LH+MN +R+P IRD L++
Sbjct: 79  YPWARLYSTSQ----TTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLK 134

Query: 413 T--SERTLTPLQDKKILDVGLWG 475
           T  + +   PL   KILDVG  G
Sbjct: 135 TIPNHQPGKPLLGMKILDVGCGG 157



 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 468 CGGGILAEGLARLGANV 518
           CGGG+L E L RLGA+V
Sbjct: 155 CGGGLLTEPLGRLGASV 171


>AL513550-3|CAI17193.1|  369|Homo sapiens coenzyme Q3 homolog,
           methyltransferase (S. cerevisiae) protein.
          Length = 369

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +2

Query: 233 YATANLYSKDENHGRTTLDSSEIKMFSKQMSEWWDVNGYLKSLHAMNKVRIPLIRDGLIQ 412
           Y  A LYS  +    TT+DS E+K F     +WWD  G    LH+MN +R+P IRD L++
Sbjct: 79  YPWARLYSTSQ----TTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLK 134

Query: 413 T--SERTLTPLQDKKILDVGLWG 475
           T  + +   PL   KILDVG  G
Sbjct: 135 TIPNHQPGKPLLGMKILDVGCGG 157



 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 468 CGGGILAEGLARLGANV 518
           CGGG+L E L RLGA+V
Sbjct: 155 CGGGLLTEPLGRLGASV 171


>AF193016-1|AAF66826.1|  310|Homo sapiens methyltransferase COQ3
           protein.
          Length = 310

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +2

Query: 233 YATANLYSKDENHGRTTLDSSEIKMFSKQMSEWWDVNGYLKSLHAMNKVRIPLIRDGLIQ 412
           Y  A LYS  +    TT+DS E+K F     +WWD  G    LH+MN +R+P IRD L++
Sbjct: 20  YPWARLYSTSQ----TTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLK 75

Query: 413 T--SERTLTPLQDKKILDVGLWG 475
           T  + +   PL   KILDVG  G
Sbjct: 76  TIPNHQPGKPLLGMKILDVGCGG 98



 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 468 CGGGILAEGLARLGANV 518
           CGGG+L E L RLGA+V
Sbjct: 96  CGGGLLTEPLGRLGASV 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,214,932
Number of Sequences: 237096
Number of extensions: 1565208
Number of successful extensions: 2357
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2357
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)