Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320E01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49945-1|AAC47925.1|  414|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF040661-5|AAG24212.1|  209|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z73427-8|CAA97804.1|  302|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL033508-4|CAE45091.1|  430|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U49945-1|AAC47925.1|  414|Caenorhabditis elegans Hypothetical
           protein C02H7.2 protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +2

Query: 263 CDILHHFSLLANLVIIICVHHVSCKNVSVRNTYVIK*TYLNANSGIVDIDINANSGIVDI 442
           CDIL  F  L +LV     H    +  S+RN  +I    L   +G+V + + A +  V I
Sbjct: 74  CDILMTFISLGHLVPATAFHEEYVQFKSIRNIVMIFFYDLFWYTGVVQLGLMAGNRFVSI 133

Query: 443 V 445
           V
Sbjct: 134 V 134


>AF040661-5|AAG24212.1|  209|Caenorhabditis elegans Hypothetical
           protein W10G11.3 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 21/85 (24%), Positives = 31/85 (36%)
 Frame = +2

Query: 251 FSPTCDILHHFSLLANLVIIICVHHVSCKNVSVRNTYVIK*TYLNANSGIVDIDINANSG 430
           F   C  L  F  +   V   C   + C N  V  T      +      I+ +DI+  +G
Sbjct: 15  FHVMCRKLTVFMAILIFVTATC-EALDCTNPEVPETTKCLEIFKELGENIIRLDISNKTG 73

Query: 431 IVDIVEAFFTFGTQICRQIYRSQPN 505
              ++E    F    CRQ    QP+
Sbjct: 74  PTKVIEICINFNR--CRQTLDCQPD 96


>Z73427-8|CAA97804.1|  302|Caenorhabditis elegans Hypothetical
           protein F58B3.8 protein.
          Length = 302

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -2

Query: 505 IRLGPINLSANLSTKSKKCFNNIHYSRICVNINIHYSRICVQISLFYNVRIPYGNIFTRY 326
           I+   +N+S+N  T+  K    I + ++  N+  + +RI V     YN+ I  G      
Sbjct: 33  IQTAIVNISSNFRTEKSK----IVHLKLKSNVPFNVTRIPVNFDNIYNITIKCGKSEEDG 88

Query: 325 MVNTYY 308
             N+Y+
Sbjct: 89  KFNSYF 94


>AL033508-4|CAE45091.1|  430|Caenorhabditis elegans Hypothetical
           protein Y106G6G.6 protein.
          Length = 430

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 443 VEAFFTFGTQICRQIYRSQPNLHK 514
           VE F TF  QIC  +  S PN  K
Sbjct: 330 VELFLTFMEQICGTLLTSSPNTQK 353


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,577,240
Number of Sequences: 27780
Number of extensions: 205812
Number of successful extensions: 498
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)