Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320D11f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    25   2.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   4.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.2  

>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 129 PKSKSMYVKSEKSAVKLKIRDGNAVDPAS 215
           P S+S+ + ++K  +KL +R  N  DP +
Sbjct: 10  PPSQSVILVAKKLGIKLNLRKINIYDPVA 38


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 455 RLESVQSVIEIFHLLDFTAADRCADPTPRTEQ 360
           RL  +QS++ + +  ++TAAD  AD     EQ
Sbjct: 272 RLSPIQSIVGVENTWNYTAAD-VADLVDSAEQ 302


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 324 QILKHNKENRYWLFRSWGRIGTTIGGSK-VEKM 419
           ++ +H   N  W   S GR+     GS+ +++M
Sbjct: 35  ELYRHPPNNGNWAVDSSGRVAVVAAGSRPIQRM 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,405
Number of Sequences: 2352
Number of extensions: 8838
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)