Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320D08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257...    28   4.0  
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225...    27   6.9  
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239...    27   9.1  
01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-70...    27   9.1  
01_01_0088 + 688792-691441,691629-693013                               27   9.1  

>08_02_1277 +
           25823835-25825113,25825201-25825418,25825501-25825724,
           25826468-25827080,25827735-25827775,25830549-25831191,
           25832595-25834012,25834110-25834251,25834415-25834522,
           25835346-25835558,25835643-25835753,25836099-25836293,
           25836555-25836695,25836835-25836909
          Length = 1806

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 468 RAASVSLTSNISLTIYNKHTISTRIELEKKQNRNDIKCRVRRGGSRLSRNEAQ 310
           RAA  SL + + ++I+   +IS RIE+ + +        + RG SR+ R  A+
Sbjct: 532 RAALRSLHTRMKVSIHTVQSISARIEVLRDEEMQPQLMELIRGLSRMWRTMAE 584


>03_06_0323 +
           33121062-33121653,33121748-33121839,33122482-33122565,
           33123126-33123203,33123500-33123700,33123821-33123928,
           33124145-33124219,33124338-33124537,33124654-33124722,
           33125159-33125279,33126840-33127120,33127522-33127594
          Length = 657

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -3

Query: 501 FNSSHAISAPHRAASVSLTSNISLTIYNKHTISTRIELEKKQNRNDIKCRVRR 343
           F SSHA +  HRAA+    +  +L +   H  +TR      + RN++ CR  R
Sbjct: 9   FPSSHAAACAHRAAAAHRDARPALRLPELH--ATR------RRRNNVACRATR 53


>11_01_0319 -
           2396835-2396951,2397035-2397105,2397219-2397297,
           2397417-2397458,2397670-2397723,2397836-2397868,
           2397959-2398039,2398144-2398230,2398313-2398388,
           2398633-2398808,2398912-2399034,2399249-2399361,
           2399521-2399632,2400054-2400273,2401986-2402314,
           2402408-2402713,2403580-2403878,2404079-2404181,
           2404266-2404369,2404840-2404906,2404911-2405076,
           2405241-2405956
          Length = 1157

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -3

Query: 474 PHRAASVSLTSNISLTIYNKHTISTRIELEKKQNRNDIKCRVRRGGSRLSRNE 316
           P  + S S  S      Y+  + S+  E ++K+N+   KC  RRGG +++  E
Sbjct: 659 PASSESDSSDSGSGSDSYSSESESSSDESDRKRNKRRKKC--RRGGDKVNMEE 709


>01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-708105,
            708462-708702,708783-708857,708932-709017,709451-709523,
            709637-709961,710092-711750,711938-713322
          Length = 1788

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -3

Query: 441  NISLTIYNKHTISTRIELEKKQNRNDIK 358
            ++S+TI +K+T S + E+EK + R DI+
Sbjct: 1046 HLSITIQDKYTESFKEEMEKIKKRVDIR 1073


>01_01_0088 + 688792-691441,691629-693013
          Length = 1344

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -3

Query: 441 NISLTIYNKHTISTRIELEKKQNRNDIK 358
           ++S+TI +K+T S + E+EK + R DI+
Sbjct: 602 HLSITIQDKYTESFKEEMEKIKKRVDIR 629


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,450,754
Number of Sequences: 37544
Number of extensions: 156290
Number of successful extensions: 429
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)