Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320D07f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 281 4e-77
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 95 4e-21
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 88 9e-19
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 87 1e-18
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 86 3e-18
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 86 3e-18
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 85 6e-18
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 79 3e-16
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 76 3e-15
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 75 6e-15
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 73 3e-14
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 69 4e-13
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 68 1e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 68 1e-12
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 65 7e-12
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 63 3e-11
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 61 1e-10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 39 5e-04
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 38 0.001
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 36 0.005
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.034
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 32 0.060
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.42
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 0.97
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 0.97
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 27 1.7
SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 3.9
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 26 3.9
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 25 5.2
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 5.2
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 25 5.2
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 25 6.8
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 25 6.8
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 25 6.8
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 6.8
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 25 9.0
SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|... 25 9.0
SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces po... 25 9.0
SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomy... 25 9.0
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 281 bits (689), Expect = 4e-77
Identities = 127/145 (87%), Positives = 134/145 (92%)
Frame = +2
Query: 86 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDT 265
++PTFK VLVGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G I FNVWDT
Sbjct: 6 NVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDT 65
Query: 266 AGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDI 445
AGQEK GGLRDGYYIQGQC IIMFDVTSR+TYKNVP+W RDLVRVCE IPIVLCGNKVD+
Sbjct: 66 AGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDV 125
Query: 446 KDRKVKAKTIVFHRKKNLQYYDISA 520
K+RKVKAK I FHRKKNLQYYDISA
Sbjct: 126 KERKVKAKAITFHRKKNLQYYDISA 150
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 95.5 bits (227), Expect = 4e-21
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Frame = +2
Query: 98 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 277
FK +L+GD G GK+ + R + + Y++T+GV+ F ++ +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 278 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 454
+F + YY II++DVT + ++ NV W +++ R EG+ +L GNK D+ D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 455 KVKAKTIV--FHRKKNLQYYDISA 520
KV ++ F N+ + + SA
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSA 152
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 87.8 bits (208), Expect = 9e-19
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Frame = +2
Query: 98 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 277
FK V +G+ GKT+ + R + +F+ Y AT+G++ + +R +WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 278 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG--IPIVLCGNKVDIKD 451
+F L Y AII++D+T+ ++ N W D VR G + IVL GNK D+ D
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGNKTDLAD 130
Query: 452 RK 457
++
Sbjct: 131 KR 132
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 87.4 bits (207), Expect = 1e-18
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGPIRFNVWDTAGQ 274
K VL+GD GK++ V R + +F+ +T+G L N ++ +WDTAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQ 74
Query: 275 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDI-K 448
E++ L YY CAI+++D+T + + +W ++L R EGI I L GNK+D+ +
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 449 DRKV--KAKTIVFHRKKNLQYYDISA 520
+R+ KA + + NL +++ SA
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSA 160
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 86.2 bits (204), Expect = 3e-18
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Frame = +2
Query: 98 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 277
FK VL+GD G GK+ + R EF + +T+GVE + I+ +WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 278 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDIKD- 451
++ + YY A+I++D+T + ++ NV W ++L + I I+L GNK D+
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 452 RKVKAKTI-VFHRKKNLQYYDISA 520
R V + F + NL + + SA
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSA 154
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 85.8 bits (203), Expect = 3e-18
Identities = 42/149 (28%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
K +++G+ G GKT+ + +++ +F K Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRD-LVRVC----EGIPIVLCGNKVDI 445
F L +Y C ++++DV + +++ + +W + L++ E P +L GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 446 KDRK---VKAKTIVF-HRKKNLQYYDISA 520
+++K K+K + F + + Y++ SA
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSA 158
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 85.0 bits (201), Expect = 6e-18
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +2
Query: 89 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 268
MPT KCV+VGDG GKT + + T +F YV T+ + + + P ++DTA
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTA 59
Query: 269 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI 445
GQE + LR Y Q ++ F VTS +++NV W ++ C G+P ++ G ++D+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDL 119
Query: 446 KD 451
+D
Sbjct: 120 RD 121
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 79.4 bits (187), Expect = 3e-16
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
K +L+GD G GK+ + R F ++ T+G++ + I+ +WDTAGQE+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDRK 457
F + YY ++++DVT + ++ NV W ++ + E + +L GNK D +D++
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 76.2 bits (179), Expect = 3e-15
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
K V++GD G GKT + + + +F ++Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE----GIPIVLCGNKVDIK 448
F L +Y C +I+++V + ++ +V NW ++ + P ++ GN++D K
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID-K 128
Query: 449 DRKVKAKTI 475
D +A ++
Sbjct: 129 DASKRAVSL 137
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 74.9 bits (176), Expect = 6e-15
Identities = 36/124 (29%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP----IRFNVWDTA 268
K VL G GTGK+ ++R + +++ + T+G++ + G I+ +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 269 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG-IPIVLCGNKVDI 445
GQEKF + YY A++++DVT++ +++ + +W D+ + I +VL G+K D+
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 446 KDRK 457
++++
Sbjct: 131 QNQR 134
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 72.9 bits (171), Expect = 3e-14
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 277
K V+VGDGG GKT + +G F ++YV T+ + + + N I +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 278 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI-KD 451
++ LR Y ++ F + + NV W+ ++ C PIVL G K D+ KD
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 452 R 454
R
Sbjct: 136 R 136
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 68.9 bits (161), Expect = 4e-13
Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +2
Query: 98 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 277
+K V+VGDGG GK+ + + F +Y T+ G + +V DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQE 67
Query: 278 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVDIKD 451
++ +R+ Y G+ ++++++TSR ++ + +++ ++RV + P+VL NK D++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 452 RKVKAK 469
+V ++
Sbjct: 128 ERVVSR 133
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 67.7 bits (158), Expect = 1e-12
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
K V+VGDG GKT + G F + YV T+ E + + I +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQED 66
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 451
+ LR Y +I F V + + NV W +++ C +PI+L G KVD+++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 67.7 bits (158), Expect = 1e-12
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
K V+VGDG GKT+ + G F +YV T+ E + + ++ +WDTAGQE+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKDRK 457
+ LR Y + ++ F + S + +NV W ++ +C +P +L G K D++
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDP 128
Query: 458 V 460
V
Sbjct: 129 V 129
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 64.9 bits (151), Expect = 7e-12
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 277
K V++GDG GKT+ + G F + Y T+ +H + N I ++WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQE 72
Query: 278 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIK 448
++ LR Y +I F V SR + +NV W ++ C G+ +VL K D++
Sbjct: 73 EYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLR 130
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 62.9 bits (146), Expect = 3e-11
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
K V+VGDG GKT + G F + YV T+ E + + + +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQED 66
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 451
+ LR Y +I F V S + NV W +++ C +PI+L K D+++
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 60.9 bits (141), Expect = 1e-10
Identities = 30/116 (25%), Positives = 52/116 (44%)
Frame = +2
Query: 95 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 274
T K ++GD GKT+ + ++ G F+++ TLGV I F++WD GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 275 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 442
+F + + MFD++ + T ++ W+R + +L G K D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 125
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 38.7 bits (86), Expect = 5e-04
Identities = 28/100 (28%), Positives = 44/100 (44%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
+ ++VG GKTT + + GE + T+G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRN----ISFTVWDVGGQDK 73
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV 400
L Y+ Q I + D R + + H +L R+
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDR---ERISEAHEELQRM 110
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 37.9 bits (84), Expect = 0.001
Identities = 24/117 (20%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
+ ++G GK++ +++ F + Y T+ + + + + DTAGQ++
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDE 66
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR--VCEGIPIVLCGNKVDI 445
+ L + I ++++ +TS+ +++ V ++ E +PIV+ GNK D+
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDL 123
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 35.5 bits (78), Expect = 0.005
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGPIRFNVWDTAGQE 277
K +L+G G+GK++ ++ + + K LG + H G + N+WD GQE
Sbjct: 4 KVLLMGRSGSGKSS-MRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQE 62
Query: 278 KF-----GGLRDGYYIQGQCAIIMFDVTSR 352
F RD + Q I +FDV SR
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 32.7 bits (71), Expect = 0.034
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
+ +++G GKTT + + + + T+G V + + I+FNVWD GQ+K
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDK 77
Query: 281 FGGLRDGYYIQGQCAIIMFD 340
L Y+ + I + D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 31.9 bits (69), Expect = 0.060
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
+ +L+G GKTT +K L E + T G ++ L +RF +WD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKC-LLNEDVNEVSPTFGFQIRTLEVEG----LRFTIWDIGGQKT 72
Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGI---PIVLCGNKVDI 445
Y+ + I + D + + N ++L+ V E + I++ NK D+
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEKLLFTSILVLANKSDV 129
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.1 bits (62), Expect = 0.42
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 107 VLVGDGGTGKTTFVKR---HLTGEFEKKYVATLGVEVHPLVFHTN 232
++VG G+GKTTF+++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 0.97
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 107 VLVGDGGTGKTTFVK 151
VL+G+ GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 0.97
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 346 GYVEHDDSTLSLNIVSVSKTTKLLLSGCVPHIKTNWPA-VRMEY*RMYFDTQS 191
G ++ D T + I+S + T + GC P+ KTNW +Y R+ D +S
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNWTCDFSYDYVRINADYRS 445
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 27.1 bits (57), Expect = 1.7
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +2
Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
K + +G GKTT + H+ + +A + +HP G +RF +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLL--HM---LKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQ 76
Query: 281 FGGLRDGYYIQGQCAIIMFDVT--SRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 442
L Y+ + + + D R++ + +P ++ GNK+D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 341 VTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAK 469
++ +Y+ VPN H++ + C + N++ I D++ K K
Sbjct: 28 ISKSCSYQKVPNSHKEFTKFCYEV-----YNEIKISDKEFKEK 65
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 406 FTYTDQISMPVRYIF-VRNSRGYVEHDDSTLSLNIVSVSKTTKLLLSGCV 260
+ YTD + +F V + +EH+ + L ++ SK +L+ CV
Sbjct: 177 YFYTDASPLKTPLVFPVPENNKEIEHEVVSEILELIEKSKNPSILVDACV 226
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 296 DGYYIQGQCAIIMFDVTSRVTYKNVP 373
D Y G+C+ M +++ V YKN P
Sbjct: 53 DSRYADGRCSAAMRSLSNYVLYKNNP 78
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 104 CVLVGDGGTGKTTFVK 151
C+LVGD TGKT ++
Sbjct: 1872 CILVGDTATGKTCILR 1887
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 11 LERVKSRFSYTIXXXXXXXXXXMADDMPT-FKCVLVGDGGTGKTTFVK 151
+E S SYT + D+P + +LVG G GK+T +K
Sbjct: 1 MEVTVSNLSYTFSPKQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLK 48
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 222 NTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNTHLN 97
+T+ TSTP V S + C L +V PP+ TNT L+
Sbjct: 45 STKASTSTPFVENC----SNLLCDLASIVEDSPPTLTNTSLS 82
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 453 LSLISTLFPHKTIGIPSHTRTKSLCQLGTFLYVTREVT 340
L+ + P T+ P H TKS + + ++ T E+T
Sbjct: 161 LNHVLAALPDDTVTYPGHEYTKSNAKFSSTIFSTPELT 198
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 492 FFLWKTIVFALTFLSLISTLFPHKTIGIPS 403
F LW V+ ++ +SL ++ FPH + + S
Sbjct: 11 FNLWSHGVYKISSISLSNSFFPHSFMFVKS 40
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 248 NELARGSYG--ILEDVLRHPESQRIFSRTLQSN 156
NE+ +GS ILE +LR P Q F L+ N
Sbjct: 333 NEVEKGSTNKEILETILRKPNLQTYFFEFLKKN 365
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 107 VLVGDGGTGKTTFVKRHLTGE 169
VL+G+ G+GKTT + ++L E
Sbjct: 530 VLLGETGSGKTTQITQYLAEE 550
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 436 FVSAQDNRDTFTYTDQISMPVRY 368
FVS + +DTF Y D + P +
Sbjct: 526 FVSPRSIKDTFAYADSVLYPSNF 548
>SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 106 CIGRRWWYWQNNLCQKTFDWRVREKIRCDSGCRSTSSSIP 225
C+G WY L K + R RE I G + ++ +P
Sbjct: 79 CVGSEEWYKAKRLSHKEVERRRREAI--SEGIKELANIVP 116
>SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -2
Query: 502 LQILFPVENNSFRLNFSVFNIHFVSAQDNRDTFTYTDQISMPVRYIFVRNSRGYVE 335
LQ LF + NS ++ +D + TY++Q+S+P Y + + Y++
Sbjct: 69 LQSLFMIIENSNIDELKQQCFYYYLLKDWEKSETYSEQVSLPKNYQHLMDGYYYLD 124
>SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 3 TLLWNELNLDFLIQSRSKIAIK 68
T +W +DF I SKI+IK
Sbjct: 253 TFVWPSSYIDFFIDDTSKISIK 274
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,383,007
Number of Sequences: 5004
Number of extensions: 52117
Number of successful extensions: 244
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -