Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320D07f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            82   1e-17
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    75   1e-15
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      25   1.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   1.5  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   3.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   4.7  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 82.2 bits (194), Expect = 1e-17
 Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +2

Query: 98  FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 277
           FK VL+G+   GK++ V R + G+F +   +T+G          +   ++F +WDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 278 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 454
           ++  L   YY   Q AI+++D+ +  ++     W ++L R     I I L GNK D+ + 
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 144

Query: 455 KV 460
           +V
Sbjct: 145 RV 146


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 75.4 bits (177), Expect = 1e-15
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = +2

Query: 101 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 280
           KCV+VGDG  GKT  +  + T  F  +YV T   + +      +   +   +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPT-SFDNYSAPMVVDGVQVSLGLWDTAGQED 66

Query: 281 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIKD 451
           +  LR   Y Q    +I + V S  +++NV + W+ ++   C   PI+L G K+D+++
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLRE 124


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 101 KCVLVGDGGTGKTTFVKR 154
           K +L+G G +GK+TF+K+
Sbjct: 35  KLLLLGTGESGKSTFIKQ 52


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 251 NVWDTAGQEKFGGLRDGYYI 310
           N+W +A  E FG  R G Y+
Sbjct: 305 NLWPSARVEMFGSFRTGLYL 324


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 152 RHLTGEFEKKYVATLGVEVHPLV 220
           RH++G+F + YV TL     PL+
Sbjct: 119 RHMSGDFPRDYVDTLKQLRSPLL 141


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 206 VHPLVFHTNRGPI 244
           VHPL FH   GPI
Sbjct: 187 VHPLAFHPIGGPI 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,955
Number of Sequences: 2352
Number of extensions: 13352
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)