Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320D02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...   157   6e-39
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...   128   2e-30
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...   126   1e-29
AF068713-1|AAC17794.1|  206|Caenorhabditis elegans Hypothetical ...    27   8.1  
AF067937-1|AAF99912.1|  533|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
           protein F55B11.1 protein.
          Length = 1358

 Score =  157 bits (380), Expect = 6e-39
 Identities = 76/129 (58%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
 Frame = +1

Query: 124 LVFYVNGKKVIESSPDPEWTLLWYXXXXXXXXXXXXXCAEGGCGACTVMVSKYNRQENKI 303
           LVFYVNGK+V E   DP+ TL  Y             C EGGCGACT+M+S     E K 
Sbjct: 16  LVFYVNGKRVEEKDVDPKMTLATYLRDKLKLTGTKIGCNEGGCGACTIMISHIENGEIK- 74

Query: 304 IHLAVNACLAPVCAMHGLAVTTVEGIGST-KTKLHPVQERIAKAHGSQCGFCTPGIVMSM 480
            H + N+CL PVC + G AVTTVEGIGS  K +LHPVQER+AKAHGSQCGFCTPG VM+M
Sbjct: 75  -HFSANSCLMPVCGVFGKAVTTVEGIGSVAKNRLHPVQERLAKAHGSQCGFCTPGFVMAM 133

Query: 481 YTLLRSCKN 507
           Y LLR+  N
Sbjct: 134 YALLRNNPN 142


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score =  128 bits (310), Expect = 2e-30
 Identities = 59/128 (46%), Positives = 81/128 (63%)
 Frame = +1

Query: 124 LVFYVNGKKVIESSPDPEWTLLWYXXXXXXXXXXXXXCAEGGCGACTVMVSKYNRQENKI 303
           + F VNGK + E + DPE TL +Y             C EG CG+CTV++  ++   NK 
Sbjct: 6   IFFNVNGKDIKEENVDPELTLAYYLRNKLGLRGTKLGCEEGVCGSCTVVLGTWDDSLNKA 65

Query: 304 IHLAVNACLAPVCAMHGLAVTTVEGIGSTKTKLHPVQERIAKAHGSQCGFCTPGIVMSMY 483
           ++ AVNACL P+  +H   V TVEG+GS + K+HP+Q+R+A+ H  QCGFC+PG VMS Y
Sbjct: 66  VYSAVNACLVPLFHVHKTFVITVEGVGS-RDKIHPIQDRMARGHAVQCGFCSPGFVMSAY 124

Query: 484 TLLRSCKN 507
            LLR+  N
Sbjct: 125 ALLRNHPN 132


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score =  126 bits (303), Expect = 1e-29
 Identities = 58/128 (45%), Positives = 80/128 (62%)
 Frame = +1

Query: 124 LVFYVNGKKVIESSPDPEWTLLWYXXXXXXXXXXXXXCAEGGCGACTVMVSKYNRQENKI 303
           + F VNGK V E + DPE TL +Y             C EG CG+CTV++  ++  +NK 
Sbjct: 6   IFFNVNGKDVNEENVDPELTLAYYLRNKLGLRGTKLGCEEGVCGSCTVVLGTWDDCQNKA 65

Query: 304 IHLAVNACLAPVCAMHGLAVTTVEGIGSTKTKLHPVQERIAKAHGSQCGFCTPGIVMSMY 483
           ++ AVNACL P+  +H   V TVEG+GS + K+HP+Q+R+A+ H  QCGFC+PG VMS Y
Sbjct: 66  VYRAVNACLVPLFHVHKTFVITVEGVGS-RDKIHPIQDRMARGHALQCGFCSPGFVMSAY 124

Query: 484 TLLRSCKN 507
            L  +  N
Sbjct: 125 ALFSNQPN 132


>AF068713-1|AAC17794.1|  206|Caenorhabditis elegans Hypothetical
           protein T24A6.7 protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 106 NKICKELVFYVNGKKVIESSP-DPEW 180
           N +C+E +F  +G +++E+SP D  W
Sbjct: 117 NNVCRENLFRTHGMRLVEASPMDRIW 142


>AF067937-1|AAF99912.1|  533|Caenorhabditis elegans Hypothetical
           protein F22F7.4 protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 7/40 (17%)
 Frame = -2

Query: 148 FYHLRR-----KQVLCI--FYSDLPQHSIIPCFTNDRKMH 50
           FYH+R        V C+  F  +LPQ   IPC  +D   H
Sbjct: 468 FYHIRDTNFLYNDVTCVNAFNCELPQRENIPCIHSDATYH 507


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,410,270
Number of Sequences: 27780
Number of extensions: 292204
Number of successful extensions: 695
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)