Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320D01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   2.7  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   8.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.2  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 118 RIPQAGTNFSNEIRTQQMFTIDFHGEG 38
           R   AGT F  +  +++ F    HGEG
Sbjct: 286 RFQHAGTRFKTKQFSKENFLATLHGEG 312


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/55 (23%), Positives = 20/55 (36%)
 Frame = +2

Query: 332 GAHSYHCHSGCTIGISVVINRVYDCFVVEKSKMMAPTRADPQHDPPAVLRTSSVL 496
           G  ++ C   C   ++  +N      +     +M PTR       P  L   SVL
Sbjct: 363 GFGAFFCFGECNFPLNTHMNATNHALIQTLVHLMHPTRVPKPCCAPTKLNPISVL 417


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -3

Query: 507 KLALSTLEVRSTAGGSCCGSARVGAIILLFSTTK-----QSYTLF 388
           +LALST++  S       GSA   ++ LL+         QSYT F
Sbjct: 593 QLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLISKVQSYTFF 637


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,618
Number of Sequences: 2352
Number of extensions: 13123
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)