Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320D01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein. 29 1.5
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl... 28 3.5
Z75713-5|CAB00054.1| 598|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical pr... 27 8.1
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 27 8.1
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 27 8.1
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 27 8.1
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 27 8.1
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 27 8.1
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 27 8.1
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 27 8.1
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 27 8.1
AL031254-3|CAJ76926.1| 180|Caenorhabditis elegans Hypothetical ... 27 8.1
AL031254-2|CAB63429.2| 344|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical protein
F26A3.8 protein.
Length = 1601
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 111 GIRTPVHRSTRMHRTSYLLGHD-DFK--VELSHN*QTEPC*ASLSFFFLFIQNVLISHLG 281
G P++ HR YL+ HD DFK EL H E ++S ++++ +I L
Sbjct: 1288 GGANPMYTFLEEHRKQYLIDHDADFKNFCELDHLITGEKSKEAISILKIYLE--MIPGLD 1345
Query: 282 AVFYAL 299
+VF+ L
Sbjct: 1346 SVFFML 1351
>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
Length = 1601
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 111 GIRTPVHRSTRMHRTSYLLGHD-DFK--VELSHN*QTEPC*ASLSFFFLFIQNVLISHLG 281
G P++ HR YL+ HD DFK EL H E ++S ++++ +I L
Sbjct: 1288 GGANPMYTFLEEHRKQYLIDHDADFKNFCELDHLITGEKSKEAISILKIYLE--MIPGLD 1345
Query: 282 AVFYAL 299
+VF+ L
Sbjct: 1346 SVFFML 1351
>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
protein 17 protein.
Length = 1146
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 246 LFIQNVLISHLGAVFYALTERTGDVERSQEL 338
+F+ + + +GAVFYA+ ++ ++ER EL
Sbjct: 444 MFLIFAVSAAVGAVFYAIRQKRKEIERQDEL 474
>Z75713-5|CAB00054.1| 598|Caenorhabditis elegans Hypothetical
protein T01G9.4 protein.
Length = 598
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 299 ECIKYSTQVGNKHVLDEKEEEAQRGSTRFCLLIMTQLNFEVVVA*QIRRPVHSC*AMHR 123
E I+ + + V +E+EE A+ +CL+ +NF+ ++A VH +H+
Sbjct: 280 ELIELADECRTLFVGEEEEEGAKENDVFWCLISKDDINFQQLIASNPWLAVHLVDLIHK 338
>Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical
protein C17G1.1 protein.
Length = 280
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 414 WKRAK*WHPPVRTHSMTHRLC 476
W +K W P RTHSM R C
Sbjct: 22 WDMSK-WMPDTRTHSMVKRQC 41
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 185 VEEKKQMSPTPSQPQHKTP 203
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 185 VEEKKQMSPTPSQPQHKTP 203
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 163 VEEKKQMSPTPSQPQHKTP 181
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 163 VEEKKQMSPTPSQPQHKTP 181
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 37 VEEKKQMSPTPSQPQHKTP 55
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 185 VEEKKQMSPTPSQPQHKTP 203
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 185 VEEKKQMSPTPSQPQHKTP 203
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 413 VEKSKMMAPTRADPQHDPP 469
VE+ K M+PT + PQH P
Sbjct: 185 VEEKKQMSPTPSQPQHKTP 203
>AL031254-3|CAJ76926.1| 180|Caenorhabditis elegans Hypothetical
protein 4R79.1b protein.
Length = 180
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 380 VVINRVYDCFVVEKSKMMAPTRADPQHDPPAVLRTSSV 493
V IN++Y C +K K+ T +P P V+ +SV
Sbjct: 93 VKINKLYSCKTKKKEKVKPATTEEPHQLIPQVVDKNSV 130
>AL031254-2|CAB63429.2| 344|Caenorhabditis elegans Hypothetical
protein 4R79.1a protein.
Length = 344
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 380 VVINRVYDCFVVEKSKMMAPTRADPQHDPPAVLRTSSV 493
V IN++Y C +K K+ T +P P V+ +SV
Sbjct: 257 VKINKLYSCKTKKKEKVKPATTEEPHQLIPQVVDKNSV 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,522,198
Number of Sequences: 27780
Number of extensions: 293233
Number of successful extensions: 793
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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