Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320C09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 304 2e-83
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 304 2e-83
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 215 3e-61
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 136 7e-33
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 136 7e-33
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 118 2e-27
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 97 7e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 65 3e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 65 3e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 61 5e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 61 5e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 61 5e-10
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 35 0.041
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 34 0.071
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.094
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 30 0.87
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 304 bits (747), Expect = 2e-83
Identities = 142/173 (82%), Positives = 154/173 (89%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEP
Sbjct: 101 NMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEP 160
Query: 183 PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 362
P+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKE
Sbjct: 161 PFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKE 220
Query: 363 GKADGKCLIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
G A GK L+EALD+I+PP RPTD+PLRLPLQDVY IGGIGTVPVGRVETG++K
Sbjct: 221 GNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIK 273
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 304 bits (747), Expect = 2e-83
Identities = 142/173 (82%), Positives = 154/173 (89%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEP
Sbjct: 101 NMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEP 160
Query: 183 PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 362
P+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKE
Sbjct: 161 PFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKE 220
Query: 363 GKADGKCLIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
G A GK L+EALD+I+PP RPTD+PLRLPLQDVY IGGIGTVPVGRVETG++K
Sbjct: 221 GNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIK 273
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 215 bits (526), Expect(2) = 3e-61
Identities = 97/126 (76%), Positives = 109/126 (86%)
Frame = +3
Query: 144 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 323
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 324 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRV 503
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVY IGGIGTVPVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 504 ETGVLK 521
ETG++K
Sbjct: 234 ETGIIK 239
Score = 37.1 bits (82), Expect(2) = 3e-61
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVA 53
NMITGTSQADCAVL+VA
Sbjct: 101 NMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 136 bits (330), Expect = 7e-33
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ +
Sbjct: 264 NMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD- 322
Query: 183 PYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERK 359
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+
Sbjct: 323 -WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY-------- 370
Query: 360 EGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETG 512
DG CL+E +D+ + P P+D PLR+ + DV + V G++E+G
Sbjct: 371 ----DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 136 bits (330), Expect = 7e-33
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ +
Sbjct: 282 NMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD- 340
Query: 183 PYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERK 359
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+
Sbjct: 341 -WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY-------- 388
Query: 360 EGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETG 512
DG CL+E +D+ + P P+D PLR+ + DV + V G++E+G
Sbjct: 389 ----DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 118 bits (285), Expect = 2e-27
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 2/175 (1%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNKMD
Sbjct: 203 NMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTV 262
Query: 183 PYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERK 359
+ E RF+EI+ +++ +++K+G+NP + +VP SG G + + T W
Sbjct: 263 KWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY---- 316
Query: 360 EGKADGKCLIEALDAILPP-ARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++
Sbjct: 317 ----SGPCFIEFIDVLLPSYKRDFNGPVRCTVAEKY--SEMGTVIIGKMESGCVQ 365
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 97.1 bits (231), Expect = 7e-21
Identities = 51/72 (70%), Positives = 56/72 (77%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+ T
Sbjct: 101 NMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRS 157
Query: 183 PYSEPRFEEIKK 218
P S R + I++
Sbjct: 158 PDSSRRSDTIQR 169
Score = 60.9 bits (141), Expect = 5e-10
Identities = 40/100 (40%), Positives = 48/100 (48%)
Frame = +1
Query: 208 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 387
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 388 LKLSMPSCHLPAPLTSPCVFPCKTYTKSVVLVPCPSAELK 507
+L PS H A LT VF + T+S L P S L+
Sbjct: 212 SRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQSDVLR 251
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 65.3 bits (152), Expect = 3e-11
Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 3/176 (1%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMI GTSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E
Sbjct: 124 NMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE- 175
Query: 183 PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 362
E + ++ E + G+N GD P +G + E
Sbjct: 176 ---EDDLDLVEMEARELLSLHGFN-------------GD-------ATPVIRGSALSALE 212
Query: 363 GKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
G+ D C LI+ALD++ P R +P+ I G GTV VG +E GVLK
Sbjct: 213 GQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLK 267
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 65.3 bits (152), Expect = 3e-11
Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 3/176 (1%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 182
NMI GTSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E
Sbjct: 124 NMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE- 175
Query: 183 PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 362
E + ++ E + G+N GD P +G + E
Sbjct: 176 ---EDDLDLVEMEARELLSLHGFN-------------GD-------ATPVIRGSALSALE 212
Query: 363 GKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
G+ D C LI+ALD++ P R +P+ I G GTV VG +E GVLK
Sbjct: 213 GQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLK 267
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 60.9 bits (141), Expect = 5e-10
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDST 176
NMITG +Q + A+L+VAA G QTREH LLA +GV ++V +NK+D
Sbjct: 128 NMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD-- 178
Query: 177 EPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVER 356
E P +E R E ++ ++ + + GY P P+ G + K P
Sbjct: 179 EVPDAETR-ELVEMDIREQLNEFGY-PGDTC--PVI--FGSALCALEGKQP--------- 223
Query: 357 KEGKADGKCLIEALD--AILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
+ G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK
Sbjct: 224 EIGEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILK 279
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 60.9 bits (141), Expect = 5e-10
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDST 176
NMITG +Q + A+L+VAA G QTREH LLA +GV ++V +NK+D
Sbjct: 129 NMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD-- 179
Query: 177 EPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVER 356
E P +E R E ++ ++ + + GY P P+ G + K P
Sbjct: 180 EVPDAETR-ELVEMDIREQLNEFGY-PGDTC--PVI--FGSALCALEGKQP--------- 224
Query: 357 KEGKADGKCLIEALD--AILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
+ G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK
Sbjct: 225 EIGEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILK 280
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 60.9 bits (141), Expect = 5e-10
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Frame = +3
Query: 3 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDST 176
NMITG +Q + A+L+VAA G QTREH LLA +GV ++V +NK+D
Sbjct: 129 NMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD-- 179
Query: 177 EPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVER 356
E P +E R E ++ ++ + + GY P P+ G + K P
Sbjct: 180 EVPDAETR-ELVEMDIREQLNEFGY-PGDTC--PVI--FGSALCALEGKQP--------- 224
Query: 357 KEGKADGKCLIEALD--AILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
+ G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK
Sbjct: 225 EIGEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILK 280
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 34.7 bits (76), Expect = 0.041
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Frame = +3
Query: 93 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 272
G T+EH LA +L V +V V K+D P Y EE K ++ ++ P V
Sbjct: 268 GTTKEHLSLALSLHVPVYLV-VTKIDMC-PAYI---LEETMKNITRLVRSAKKLPILVRN 322
Query: 273 VPISGWHGDNMLEPSTKM-PWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK--PLR 443
+ N PS K+ P F QV EG L+ ++P R ++ P
Sbjct: 323 MDDCVHAAVNF--PSKKVCPIF---QVSNVEGT--NLPLLRQFLNMVPLRRQLNENDPAH 375
Query: 444 LPLQDVYXIGGIGTVPVGRVETGVLK 521
+ D+Y + G+GT+ G + +G ++
Sbjct: 376 FQIDDIYWVDGVGTIASGTLLSGTIR 401
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.071
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Frame = +3
Query: 93 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 272
G T+EH LA +L V +V V K+D E + I + V S KK+
Sbjct: 267 GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETMKNITRLVRS-AKKL--------- 315
Query: 273 VPISGWHGDNMLEPSTKMPWFKG---WQVERKEGKADGKCLIEALDAILPPARPTDK--P 437
PI + D+++ + P K +QV EG L+ I+P R ++ P
Sbjct: 316 -PILVRNMDDVVHAAVNFPSKKVCPIFQVSNVEGT--NLPLLRQFLNIVPLRRQLNENDP 372
Query: 438 LRLPLQDVYXIGGIGTVPVGRVETGVLK 521
+ D+Y + G+GT+ G + +G ++
Sbjct: 373 AHFQIDDIYWVDGVGTIASGTLLSGTIR 400
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.094
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 163 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 35
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 30.3 bits (65), Expect = 0.87
Identities = 46/172 (26%), Positives = 75/172 (43%)
Frame = +3
Query: 6 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 185
++ ++ D A++I+ + AGI QT EH LLA ++I+ +NK D E
Sbjct: 89 VLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE-- 139
Query: 186 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 365
+ + E K+V +K +G + + PI +E S +FK +E
Sbjct: 140 --KSKISESAKKVRKGLKSMGVDENS----PI--------VEMSLADGYFK------EEM 179
Query: 366 KADGKCLIEALDAILPPARPTDKPLRLPLQDVYXIGGIGTVPVGRVETGVLK 521
+ K IE+ I P R + + + + I G GTV G V GVL+
Sbjct: 180 LQNLKLAIES--RIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLR 229
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 226 PHTSRRLATTQLLSLSCPFLD 288
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 226 PHTSRRLATTQLLSLSCPFLD 288
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 226 PHTSRRLATTQLLSLSCPFLD 288
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 226 PHTSRRLATTQLLSLSCPFLD 288
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,192,154
Number of Sequences: 27780
Number of extensions: 288958
Number of successful extensions: 936
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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