Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320C05f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.026
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 29 0.42
SPCC613.08 |||CDK regulator |Schizosaccharomyces pombe|chr 3|||M... 29 0.42
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 27 1.7
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 27 1.7
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 5.2
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 25 5.2
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 25 5.2
SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|c... 25 5.2
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 25 6.8
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 25 6.8
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 25 6.8
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 25 6.8
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 25 9.0
SPBC12C2.04 |||NAD binding dehydrogenase family protein|Schizosa... 25 9.0
SPAC23H3.07c |mrp2||mitochondrial ribosomal protein subunit S14|... 25 9.0
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 25 9.0
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 9.0
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 33.1 bits (72), Expect = 0.026
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 49 IQLHRDTTVQS-LTVQPTVRDGVVIYEDSPLVKAVKFGHVLVVDEADKAPTHVTCILKTL 225
I H T +Q + T +G + + + LV+A++ G+ +V+DE + APT V L L
Sbjct: 925 INNHEHTDLQEYIGTYVTDDNGSLSFREGVLVEALRNGYWIVLDELNLAPTDVLEALNRL 984
Query: 226 V-ENGEMVLSDGRRIV 270
+ +N E+ + + + +V
Sbjct: 985 LDDNRELFIPETQVLV 1000
Score = 27.1 bits (57), Expect = 1.7
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +1
Query: 121 YEDSPLVKAVKFGHVLVVDEADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMESSGG 300
+ + LVKAV+ GH +++DE + A L+TL G+++ S ++ S G
Sbjct: 627 FVEGALVKAVRSGHWVLLDEINLAS------LETLEPIGQLLSS-----YESGILLSERG 675
Query: 301 EVSSFIPVHDDFRMIVLAN 357
+++ P H +FR+ N
Sbjct: 676 DITPITP-HKNFRLFGCMN 693
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 29.1 bits (62), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 97 TVRDGVVIYEDSPLVKAV----KFGHVLVVDEADKAPTHVTCILKTLVENGEMVLSDG 258
T RD +++ E +AV + + ++VDEA +A C+++ L+ + +V G
Sbjct: 368 TTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGG 425
>SPCC613.08 |||CDK regulator |Schizosaccharomyces pombe|chr
3|||Manual
Length = 325
Score = 29.1 bits (62), Expect = 0.42
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 196 THVTCILKTLVENGEMVLSDGRRIVP-KDMMESSGGEVSSFIPVHDDFRMIVLANRPGFP 372
TH + +T E ++ D R K ++SG EV F P + FR + + + +P
Sbjct: 221 THYLLLSRTYTEIESKLMDDERPSKKGKKSKKTSGEEVMFFHPEDEQFREVAI-DIADYP 279
Query: 373 FLGNDF 390
F DF
Sbjct: 280 FANQDF 285
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 27.1 bits (57), Expect = 1.7
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 160 HVLVVDEADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMESSGGE---VSSFIPVHD 330
H+ +++E+D A + C TL + + D +I P +SS E +S + D
Sbjct: 118 HIPIIEESDNASNNKLC---TLFKKSKQPNLDFLQIKPFMFWDSSLNETVRISERSIIRD 174
Query: 331 DFRMIVLANRPGFPFL--GNDFFASLGDLFSCHAVDNPSIDSEMELLRSYGPDV 486
M++ P F FL G+ L L H + + S M L YG ++
Sbjct: 175 SIYMLI--GYPSFFFLKNGSKIETRLSLLPKLHHMSEEILRSIMTELADYGSNL 226
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 27.1 bits (57), Expect = 1.7
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = -1
Query: 398 EAKKSLPRNGKPGRLANTIILKSSCTGMKLDTSPPELSIISLGTILRPSLRTISPFSTRV 219
E+ K + N +P +T+ ++ M + S+IS T +PS RT PF
Sbjct: 626 ESTKVVVDNQQPQPKISTVS-DTAVPSMSFANNISSRSVISAATDSKPSTRTSPPFVNNT 684
Query: 218 FRIHVT*VGALSASSTTN 165
I ++ASS TN
Sbjct: 685 KPIVAKSPVTVTASSETN 702
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 194 GALSASSTTNT*PNLTAFTNGESSYITTPSLTVGCTVKDCTVVSLCSWMY 45
GAL +++T ++T SS TP+ T T T + LC Y
Sbjct: 836 GALGPVQSSSTTSSITPTPTTTSSITPTPTTTSTTTTAQSTGMQLCGSNY 885
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 241 MVLSDGRRIVPKDMMESSGGEVSSF 315
MVL+DG V D S G +V SF
Sbjct: 4 MVLADGMPTVKDDSTRSRGSDVDSF 28
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +1
Query: 298 GEVSSFIPVHDDFRMIVLANRPGFPFLGNDFFASLGDLFSCHAVDNPSIDSEMELL 465
G+ S + + V+ PG G + +G+L H VD +++ ++L
Sbjct: 437 GKTSCLYAICRELNFEVVEIHPGMRRSGKELLERIGELTQSHIVDKSRLNNTPDIL 492
>SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 298
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 79 SLTVQPTVRDGVVIYEDSPLVKAVKFGHVLVVDEADKA 192
+L V+ + G Y+D + ++ +GHVLV+D A +A
Sbjct: 29 TLKVKKVLYAGKSKYQDVLVFESETYGHVLVLDGAIQA 66
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 82 LTVQPTVR-DGVVIYEDSPLVKAVKFGHVLVVDEADKAPTHVTCIL 216
L V P V +G V+Y+ +V + L +D DK TC L
Sbjct: 79 LHVFPCVHLNGCVVYDKGEIVACAALKNSLAIDIIDKLKDIQTCAL 124
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 25.0 bits (52), Expect = 6.8
Identities = 7/32 (21%), Positives = 21/32 (65%)
Frame = +1
Query: 139 VKAVKFGHVLVVDEADKAPTHVTCILKTLVEN 234
VK +++GH++++ + D +H+ ++ +E+
Sbjct: 569 VKGLRYGHLMIMTDQDHDGSHIKGLIINYLES 600
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 267 DSSAVTQDHLSVLNQGLQNTRHMSRSL 187
+S V HL VL +GLQ +++++S+
Sbjct: 73 ESLQVIHSHLPVLQKGLQECQNLNKSV 99
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 25.0 bits (52), Expect = 6.8
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = +1
Query: 172 VDEADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMESSGGEVSSFIPVHDDFRMIVL 351
VD D A HV + + NG M++S G D+ + E + V + + +
Sbjct: 237 VDVRDVAAAHVFALENAKLSNGRMLVSKG-VFTTGDICKVLRKEFPNKSDVIAE--PVDI 293
Query: 352 ANRPGFPFLGNDFFASLGDLFSCHAVDNPSIDSEMEL 462
P F L N F SLG F H+ + +D+ +L
Sbjct: 294 TVDPSFFKLDNSFSKSLG--FKYHSDEECYVDTAKKL 328
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1095
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 4 IADRLLQLMNRPREYIQLHRDTTVQSL 84
I RLL L+ P+ Y+Q TT+ ++
Sbjct: 497 ILQRLLTLLQSPKRYVQEQAVTTIATV 523
>SPBC12C2.04 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 421 HAVDNPSIDSEMELLRSYGPDVPRDVMKKLVQA 519
H P +D E+E+LR Y P+ + K + A
Sbjct: 112 HGCTTPGMDMELEILRKY-PNAALFIEKPITSA 143
>SPAC23H3.07c |mrp2||mitochondrial ribosomal protein subunit
S14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 105
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 406 HPEKRRNRCPETG 368
HP K +NRC ETG
Sbjct: 60 HPTKIKNRCIETG 72
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 24.6 bits (51), Expect = 9.0
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 1/106 (0%)
Frame = +1
Query: 109 GVVIYEDSPLVKAVKFGHVLVVDEAD-KAPTHVTCILKTLVENGEMVLSDGRRIVPKDMM 285
G+ ++ED A + V DE D + H + ++ G R I +
Sbjct: 485 GLKLHEDWGSTPAAIDSCLSVCDEYDVQCLIHTDTLNESSFVEGTFKAFKNRTIHTYHVE 544
Query: 286 ESSGGEVSSFIPVHDDFRMIVLANRPGFPFLGNDFFASLGDLFSCH 423
+ GG I + + ++ + P PF N L L CH
Sbjct: 545 GAGGGHAPDIISLVQNPNILPSSTNPTRPFTTNTLDEELDMLMVCH 590
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 69 DRAVLD-RTADCERWCRYI 122
D +LD AD +RWC+YI
Sbjct: 875 DTGMLDIEPADYDRWCQYI 893
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,163,759
Number of Sequences: 5004
Number of extensions: 43319
Number of successful extensions: 152
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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