Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320C05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 39 0.002
10_07_0081 - 12716130-12716271,12716367-12716449,12716729-127167... 32 0.32
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 30 0.98
01_06_0067 + 26157657-26157723,26158710-26158843,26158921-26159160 30 0.98
08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811 29 1.7
05_01_0313 - 2461487-2461861,2461929-2462513,2462819-2464154,246... 29 1.7
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 29 1.7
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 29 2.3
04_04_0694 - 27311910-27312056,27314277-27314420,27315085-273151... 28 5.2
07_03_1347 + 25932185-25932748,25933151-25933755,25935797-259362... 27 6.9
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 27 9.1
04_01_0245 + 3209755-3209798,3209852-3210398 27 9.1
03_02_0575 + 9581220-9581622,9581741-9583035 27 9.1
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 27 9.1
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 49 IQLHRDTTVQS-LTVQPTVRDGVVIYEDSPLVKAVKFGHVLVVDEADKAPTHVTCILKTL 225
I H T +Q L T G + +++ LVKAV+ GH +V+DE + AP+ V L L
Sbjct: 957 INNHEHTDLQEYLGTYVTDSHGKLQFQEGALVKAVREGHWIVLDELNLAPSDVLEALNRL 1016
Query: 226 V-ENGEMVLSDGRRIVP 273
+ +N E+ + + + +P
Sbjct: 1017 LDDNRELFVPELQETIP 1033
>10_07_0081 -
12716130-12716271,12716367-12716449,12716729-12716785,
12716886-12716942,12717014-12717113,12717204-12717274,
12718284-12718460,12719142-12719312,12722151-12722234,
12722310-12722354,12722447-12722537,12722745-12722863,
12723213-12723434,12723630-12723854,12725366-12725571,
12726081-12726258,12726702-12726762,12727930-12728039,
12728126-12728257,12729136-12729208,12729608-12729645,
12730373-12730474,12730565-12730622,12731071-12731172,
12731240-12731386,12732023-12732159,12732256-12732405,
12733103-12733259,12733615-12733673,12733982-12734138,
12734209-12734354,12739177-12739320,12739478-12739606
Length = 1309
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 154 FGHVLVVDEADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMESSGG--EVSSFIPVH 327
+ +V A +P+ VT L G + DG++++P+D GG +++ + +H
Sbjct: 18 WAEAVVTSPASSSPSSVTVTLA----GGAKAVVDGKKVLPRDTEADLGGVDDMTKLVYLH 73
Query: 328 DDFRMIVLANRPGF 369
+ + LA R GF
Sbjct: 74 EPGVLCNLARRYGF 87
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 30.3 bits (65), Expect = 0.98
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 43 EYIQLHRDTTVQSLTVQPTVRDGVVIY-EDSPLVKAV--KFGHVLVVDEADKAPTHVTCI 213
EY++ H TV L P G + Y E L +AV K V+++DE +KA + I
Sbjct: 691 EYMERH---TVSKLIGSPP---GYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNI 744
Query: 214 LKTLVENGEMVLSDGRRIVPKDMM 285
L + E+G + S GRR+ K+ +
Sbjct: 745 LLQIFEDGHLSDSQGRRVSFKNTL 768
>01_06_0067 + 26157657-26157723,26158710-26158843,26158921-26159160
Length = 146
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 79 SLTVQPTVRDGVVIYEDSPLVKAVKFGHVLVV-DEADKAP 195
SL PTV + Y DS L+K G +++V +E D AP
Sbjct: 40 SLLDLPTVMESYKTYNDSVLIKTADIGQMIMVREEDDPAP 79
>08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811
Length = 359
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = -3
Query: 390 EIVAQKRETRSIGQHDHPEVIVYGNEARHFAT*ALHHILRDDSSAVTQDHLSVLNQGLQN 211
EI ++ E R +G H H + +E + H+L D +T +L + G +
Sbjct: 290 EIELEEEEQRQLGHHHHQHHHEHEHENHQWDEEEAQHLLMWDQEVLTSSNLEAMQSGAHS 349
Query: 210 TRHM 199
M
Sbjct: 350 LLFM 353
>05_01_0313 -
2461487-2461861,2461929-2462513,2462819-2464154,
2464231-2464338,2464421-2464743
Length = 908
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 395 AKKSLPRNGKPGRLANTIILKSSCTGMKLDTSPPELSIISLG 270
AK++ PR+GK N I S C + LD P + + +G
Sbjct: 688 AKQNFPRSGKCLLSGNPISSSSDCAVLVLDLDTPAMLVCKIG 729
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +1
Query: 163 VLVVDEADKAPTHVTCILKTLVENGEMVLSDGRRIVPKD---MMESSGGEVS 309
V+++DE +KA + IL + E+G + S GRR+ K+ +M S+ G S
Sbjct: 751 VVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTS 802
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 181 ADKAPTHVTCILKTLVENGEMVLSDGRR 264
A K P HV C++ E G + SDGRR
Sbjct: 157 AAKLPEHVRCVVIGSDEYGRLAASDGRR 184
>04_04_0694 -
27311910-27312056,27314277-27314420,27315085-27315108,
27315570-27315713,27316372-27316423,27316534-27316599,
27316724-27316955,27316970-27317081
Length = 306
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 349 LANRPGFPFLGNDFFASLGDLFSCHAVDNPSIDSEMELLRSYGP 480
L ++ GFPF FF S+G L S ++D +EL R Y P
Sbjct: 11 LVSKCGFPFGLVGFFVSIGFLVSNVSLDRFGGAGFLELERGYQP 54
>07_03_1347 +
25932185-25932748,25933151-25933755,25935797-25936214,
25936433-25936555,25936775-25936989,25937157-25937412,
25937844-25938149,25938764-25938820,25939635-25939685
Length = 864
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 370 PFLGNDFFASLGDLFSCHAVDNPSIDSEMELLRSYGPDVPRDVMKKLV 513
PFLG +F C V + S+DS + LLR++ + DV K ++
Sbjct: 121 PFLGMSRHRRPA-VFGCGVVADGSVDSCVWLLRAFKESIQGDVPKSVI 167
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 516 LHQLLHDIPRH---VWSVRAEKLHLRIDRGIVDGVTREQITQRSEEIVAQKRETRS 358
L+++LH IP+H + +R E + +R GV + + QR +EI + RE ++
Sbjct: 482 LNKILHSIPKHEDELAHLREEHNKIAKERQ-TSGVKYQMLKQRLDEIDTKLRELKA 536
>04_01_0245 + 3209755-3209798,3209852-3210398
Length = 196
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 298 GEVSSFIPVHDDFRMIVLAN--RPGFPFLGNDFFASLGDLFSCHAVDNPSIDSEM 456
G +S+ + +H D +L +P L N+F A L D DN +I S M
Sbjct: 21 GIISALVYLHHDSDPYILHRDIKPSNILLDNNFNARLADFGLSRTADNGTIQSSM 75
>03_02_0575 + 9581220-9581622,9581741-9583035
Length = 565
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 383 TISSLL-WVICSRVTPSTIPRSIRRWSFSARTDQTCLGMS*RSW 511
TI ++L WVI R+ + RSI+R S S + GMS W
Sbjct: 512 TIGTMLYWVIAHRIEAKRM-RSIKRSSLSRSRSFSASGMSEAEW 554
>01_01_0588 +
4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -2
Query: 403 PEKRRNRCPETGNQVD-WPT 347
P KRR C NQVD WP+
Sbjct: 459 PRKRRKHCSSNENQVDSWPS 478
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,103,427
Number of Sequences: 37544
Number of extensions: 317887
Number of successful extensions: 1010
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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