Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320C05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1328|AAN09251.1| 1386|Drosophila melanogaster CG12149-P...   248   3e-66
AF217651-4|AAF35310.1|  769|Drosophila melanogaster c12.2 protein.     71   1e-12
AE014134-68|AAF51524.1|  968|Drosophila melanogaster CG17075-PA ...    30   2.2  

>AE014298-1328|AAN09251.1| 1386|Drosophila melanogaster CG12149-PA
            protein.
          Length = 1386

 Score =  248 bits (608), Expect = 3e-66
 Identities = 119/173 (68%), Positives = 140/173 (80%)
 Frame = +1

Query: 1    KIADRLLQLMNRPREYIQLHRDTTVQSLTVQPTVRDGVVIYEDSPLVKAVKFGHVLVVDE 180
            K+ DRLL+LM RPREYIQLHRDTTV SLT+Q T++DG V YEDS LV+AV+ GHVLVVDE
Sbjct: 766  KLVDRLLELMQRPREYIQLHRDTTVHSLTLQATLKDGQVSYEDSALVQAVRTGHVLVVDE 825

Query: 181  ADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMESSGGEVSSFIPVHDDFRMIVLANR 360
            ADKAP +VTCIL+TLVE+GEMVL+DGRRIVP       GG V + I  H DFR+IVLANR
Sbjct: 826  ADKAPVNVTCILRTLVESGEMVLADGRRIVP----PGEGGRVPNSIETHPDFRLIVLANR 881

Query: 361  PGFPFLGNDFFASLGDLFSCHAVDNPSIDSEMELLRSYGPDVPRDVMKKLVQA 519
            PGFPFLGNDFFA+LGD+FSCHA+ NP  +SE+ LL+ YGP VP   ++ LV A
Sbjct: 882  PGFPFLGNDFFAALGDVFSCHAISNPDPESEIFLLQQYGPKVPIKTLRTLVNA 934



 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
 Frame = +1

Query: 1   KIADRLLQLMNRPREYIQLHRDTTVQSLTVQPTVRDGVVIYEDSPLVKAVKFGHVLVVDE 180
           ++A + L+L  R  EY+ L RDTT   L  +  + D   I+ D   V+A   G VLV+D 
Sbjct: 108 QLAMQFLELTQREVEYVALSRDTTESDLKQRREINDRAAIFHDQGAVRAALNGRVLVLDG 167

Query: 181 ADKAPTHVTCILKTLVENGEMVLSDGRRIVPKD----MMESSGGEVS---SFIPVHDDFR 339
            + A  +V  IL  L+EN EM L  G+ ++  +    ++E    E       + V + FR
Sbjct: 168 VEHAERNVLPILNNLLENREMHLESGKFLMSPERYDKLLEKHSREQLDEWGLLRVSEQFR 227

Query: 340 MIVLANRPGFPFLGNDFFASLGDLFSCHAVDNPSIDSEMELLRSYGPDVPRDVMKKLV 513
           ++ L   P   + G      L   F    V   S     E L+   P VP + +K+L+
Sbjct: 228 VVAL-GLPTHKYKGTPLDPPLRSRFQSRNVTTYSYGELYEELQQEAPSVPGEQLKQLL 284



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
 Frame = +1

Query: 4   IADRLLQLMNRPREYIQLHRDTTVQSLTVQP-TVRDGVVIYEDSPLVKAVKFGHVLVVDE 180
           +   LL+L+ +  E + L+ D T + +  Q  T   G  ++ DSPLV+A K G V V++ 
Sbjct: 432 LTQELLRLLQQTSEPMMLYEDMTSRDIVQQRITSPQGDTVWRDSPLVRAAKSGSVAVLNG 491

Query: 181 ADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMES------SGGEVSS--FIPVHDDF 336
             +       +L+ L+ + E+ L DG  ++  +  ++      S  E+    F+P+H+ F
Sbjct: 492 LHRLHKSTASVLQRLIHDRELQLCDGTTLLGANRYQALLQQGFSKEELGKLGFLPIHESF 551

Query: 337 RMIVLANRP 363
           R++ LA  P
Sbjct: 552 RVVALAEPP 560


>AF217651-4|AAF35310.1|  769|Drosophila melanogaster c12.2 protein.
          Length = 769

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
 Frame = +1

Query: 1   KIADRLLQLMNRPREYIQLHRDTTVQSLTVQPTVRDGVVIYEDSPLVKAVKFGHVLVVDE 180
           ++A + L+L  R  EY+ L RDTT   L  +  + D   I+ D   V+A   G VLV+D 
Sbjct: 108 QLAMQFLELTQREVEYVALSRDTTESDLKQRREINDRAAIFHDQGAVRAALNGRVLVLDG 167

Query: 181 ADKAPTHVTCILKTLVENGEMVLSDGRRIVPKD----MMESSGGEVS---SFIPVHDDFR 339
            + A  +V  IL  L+EN EM L  G+ ++  +    ++E    E       + V + FR
Sbjct: 168 VEHAERNVLPILNNLLENREMHLESGKFLMSPERYDKLLEKHSREQLDEWGLLRVSEQFR 227

Query: 340 MIVLANRPGFPFLGNDFFASLGDLFSCHAVDNPSIDSEMELLRSYGPDVPRDVMKKLV 513
           ++ L   P   + G      L   F    V   S     E L+   P VP + +K+L+
Sbjct: 228 VVAL-GLPTHKYKGTPLDPPLRSRFQSRNVTTYSYGELYEELQQEAPSVPGEQLKQLL 284



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
 Frame = +1

Query: 4   IADRLLQLMNRPREYIQLHRDTTVQSLTVQP-TVRDGVVIYEDSPLVKAVKFGHVLVVDE 180
           +   LL+L+ +  E + L+ D T + +  Q  T   G  ++ DSPLV+A K G V V++ 
Sbjct: 432 LTQELLRLLQQTSEPMMLYEDMTSRDIVQQRITSPQGDTVWRDSPLVRAAKSGSVAVLNG 491

Query: 181 ADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMES------SGGEVSS--FIPVHDDF 336
             +       +L+ L+ + E+ L DG  ++  +  ++      S  E+    F+P+H+ F
Sbjct: 492 LHRLHKSTASVLQRLIHDRELQLCDGTTLLGANRYQALLQQGFSKEELGKLGFLPIHESF 551

Query: 337 RMIVLANRP 363
           R++ LA  P
Sbjct: 552 RVVALAEPP 560


>AE014134-68|AAF51524.1|  968|Drosophila melanogaster CG17075-PA
           protein.
          Length = 968

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -3

Query: 492 PRHVWSVRAEKLHLRIDRGIVDGVTREQITQRSEEIVAQKRETRSIGQHDHPEVIVYGNE 313
           P+  + VR+E  H+        G+T       ++ +V   R+  S+G  D PE I+ G +
Sbjct: 12  PKGAYGVRSETDHIITIS--TAGLTESHSESPAKGVVTPVRKPHSLGSEDSPENIIPGEQ 69

Query: 312 A 310
           A
Sbjct: 70  A 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,388,357
Number of Sequences: 53049
Number of extensions: 507655
Number of successful extensions: 1478
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)