Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320C03f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 31 0.079
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 31 0.10
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 28 0.97
SPCC16A11.16c |||ARM1 family|Schizosaccharomyces pombe|chr 3|||M... 28 0.97
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 28 0.97
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 28 0.97
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 27 1.3
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 27 2.2
SPCC584.16c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 3.0
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 26 3.9
SPMIT.05 |cob1|cob|cytochrome b, Cob1|Schizosaccharomyces pombe|... 26 3.9
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 26 3.9
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 5.2
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 25 5.2
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 5.2
SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces pomb... 25 6.8
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 6.8
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 25 6.8
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 25 9.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 9.0
SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|c... 25 9.0
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 9.0
SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit ... 25 9.0
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 31.5 bits (68), Expect = 0.079
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 225 IVYERSFMLSLRQSPISQTPPQCALPAALLKNPSS 329
I+ E+S + +Q P S PP+ ALPA + PSS
Sbjct: 236 ILREQSKQIPTQQKPSSLPPPERALPAPTMPTPSS 270
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 31.1 bits (67), Expect = 0.10
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +3
Query: 252 SLRQSPISQT----PPQCALPAALLKNPSSVPNVQPASTQKPRSNSISF-DESQETF 407
SL SP+ T PP+ L LL PS + N+Q ++T+ SNSI + ++Q F
Sbjct: 35 SLLDSPLLSTNEHYPPKSTL---LLSGPSPIRNIQLSATKSSESNSIDYLTDTQNIF 88
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 370 DRGFCVL-AGCTLGTEDGFFSRAAGSAHCGG-VWEIGDCRRDNMNDL 236
D C++ AG + GF R +A C G VW I CR +++L
Sbjct: 429 DGPMCLIGAGVGIAPFRGFVQRRLANAACTGKVWIIQGCRDQKLDEL 475
>SPCC16A11.16c |||ARM1 family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 388
Score = 27.9 bits (59), Expect = 0.97
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 119 DSFKEGPDHGSRSNA*CLFQHTGRNHLLNYSWRYKNSVREVVHVIPSAISDFPNATAMCT 298
+S G D S S LF ++ L +++W + E ++P FPN
Sbjct: 144 NSSSRGTDDSSTSQLLQLFGAASQDALQDFNWEVLSPTAEAPAILPR----FPNVNESAN 199
Query: 299 S-RSPTEESVFGTQRAAGQH 355
R+ +E ++ G AG++
Sbjct: 200 MYRASSESNLNGPHATAGEN 219
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 27.9 bits (59), Expect = 0.97
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -2
Query: 328 EDGFFSRAAGSAHCGGVWE 272
ED F+++A+G+ + GG W+
Sbjct: 36 EDNFYAKASGNLYLGGTWK 54
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 237 RSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSI 380
+S + SL +P S T Q + L+ PSS Q KP N I
Sbjct: 217 QSTLFSLNTAPFSATSQQLVHDSVSLRRPSSNIPAQKPIPPKPEQNEI 264
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 27.5 bits (58), Expect = 1.3
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 72 IMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRI--VYERSF 245
+ S+ PI + + S++ + PA P+ S P +I + P T + YE+
Sbjct: 276 VASSKPIKK--AWASVAKSKKKVTPAPAPAPESEPSKP--SIAPSQPSKTNVSAAYEKPA 331
Query: 246 MLSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSI 380
LS P A PA + PS+ + ST N++
Sbjct: 332 ELSSSSVPFPHKSQDSATPANVETTPSTATSAPKKSTAPFAINAV 376
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 26.6 bits (56), Expect = 2.2
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Frame = +3
Query: 54 TPRKFLIMSASPIARQATHSQSIPSRRVLI---TDPAQMPDVYSSTPGGTIYSTTPGGTR 224
TPRK L + SP HS+SI R P+ +P + GG + ++
Sbjct: 420 TPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPPSTVPKMNPKLQGGNSVTAPSTPSK 479
Query: 225 IVYERSFMLSLR----QSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSI 380
++ S ++ + +S + + P LPAA K + + AS P ++I
Sbjct: 480 VLPAMSPKVAPKFQGGRSSTAPSTPNKVLPAASAKAAPKLQE-KAASFDIPNKSTI 534
>SPCC584.16c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 231
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 252 SLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSI 380
S R S QTPP LP+ LL + P+ P +P+ NS+
Sbjct: 15 SKRSSRKRQTPPMPELPSFLL----AFPHAPPLGFLRPKLNSL 53
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 267 PISQTPPQCALPAALLKNPSSVPNVQPASTQKP 365
PI + P A PAA +K+P S P++ A P
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 135 VLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQT 281
VL+TD +P+V+SS G + P +R + E + ISQ+
Sbjct: 109 VLVTDEQDVPEVWSSKSLGKLEGFMPELSRQIVETDRSVMEHVDKISQS 157
>SPMIT.05 |cob1|cob|cytochrome b, Cob1|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 387
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 264 SPISQTPPQCALPAALLKNPSSV 332
+P P CALPA LK P S+
Sbjct: 247 NPYGFMEPDCALPADPLKTPMSI 269
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 87 PIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGT 221
P + Q + S + V+++ + + SSTP TIYS T G T
Sbjct: 108 PSSSQTISASSSTTDNVIVS--SSISSTVSSTPVSTIYSGTSGTT 150
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.4 bits (53), Expect = 5.2
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Frame = +3
Query: 60 RKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGG---TIYSTTPGG--TR 224
RK I S P Q +S+PS++ T + S P T + P T
Sbjct: 676 RKESIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQHTRQESLPSQQTTE 735
Query: 225 IVYERSFMLSLRQSPISQTPPQCALPAALLKNPS-----SVPNVQPASTQKPRSNSISFD 389
+ R + +Q Q Q +LP+ S+P+ QP+ Q+ R S+
Sbjct: 736 TKHLRKESIPSKQPTEGQHARQESLPSQQTTETKHLRKESIPSKQPSGGQQLRQESLPSQ 795
Query: 390 ESQET 404
+S E+
Sbjct: 796 QSSES 800
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 176 QHTGRNHLLNYSWRYKNSVREVVHVIPSAISD 271
++TG HL W Y N +E ++ S IS+
Sbjct: 361 RNTGLPHLSRVVWTYSNQYKEEPSIMNSNISN 392
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 78 SASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGT-IYSTTPGGTRIVYERSF 245
+ SP + HS+ P + A + ++++TP G Y + G + Y SF
Sbjct: 256 TVSPTNEPSAHSRPSPQGTTANSSSASISSLHNTTPDGEGKYRSVQNGRALNYVSSF 312
>SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 405
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 258 RQSPISQTPPQCALPAALLKNPS-SVPNVQPASTQKPRSNSIS 383
R+ P + +CA+ +LKNP+ S+ ST +P S +S
Sbjct: 298 RERPGNTHAEECAIEKFMLKNPTDSLEGAIMYSTMEPCSKRLS 340
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 57 PRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPD 167
P+ F + SA +ARQA + I +++ + + PD
Sbjct: 33 PKAFAVASAGRMARQAMRTADISQKKLHVPMVDRTPD 69
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 312 LKNPSSVPNVQPASTQKPRSNSI 380
+KN + V NV PA+ P SN+I
Sbjct: 602 VKNINIVSNVDPANASTPLSNTI 624
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 234 ERSFMLSLRQSPISQTPPQCALPA-ALLKNPSSVPNVQPASTQKPRSNSISFDESQETFS 410
+R+ LSL++ P S+ PP P+ A + + + R+ +IS +E+Q++
Sbjct: 266 KRAIELSLKEMPQSREPPSYERPSEANVVISQDQHLTEDEDEELKRAIAISLEEAQKSSQ 325
Query: 411 MD 416
D
Sbjct: 326 KD 327
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 282 PPQCALPAALLKNPSSVPNVQPASTQKP 365
PP ++P+ +PS P + P S++ P
Sbjct: 1035 PPTVSVPSPSALSPSVTPQLPPVSSRLP 1062
>SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 370 DRGFCVLAGCTLGTEDGFFSRAAGS 296
+RGF + GC LG G A G+
Sbjct: 147 NRGFVIFGGCYLGLTAGMLWAAQGA 171
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 24.6 bits (51), Expect = 9.0
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 SQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPP- 287
+Q+I S + P + +S+ G + STT T S + SPI+ + P
Sbjct: 265 TQTIDSSSFTSSTPVSLTSSSTSSSGSSQDSTTIDSTPSTIATSTLQPTTSSPITTSAPS 324
Query: 288 -QCALPAALLKNPSSVPNVQP-ASTQKPRSNSISFDESQET 404
ALP + S+ V+ T S+ +++ ET
Sbjct: 325 LSSALPTTYPSSLSTEVEVEYFTKTITDTSSIVTYSTGVET 365
>SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit
Pmc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 879
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 194 HLLNYSWRYKNSVREVVHVIPSAISDFPNATAMCTSRSPTEESV 325
H LN R + S+ E+ IP+ F A CT P E SV
Sbjct: 159 HALNMLIRIRLSLYEI---IPTPFQHFTIANGRCTFTVPNEFSV 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,179,055
Number of Sequences: 5004
Number of extensions: 45476
Number of successful extensions: 152
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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