Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320C02f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001706-1|AAH01706.1| 161|Homo sapiens chromosome 11 open read... 47 5e-05
AK000632-1|BAA91297.1| 161|Homo sapiens protein ( Homo sapiens ... 47 5e-05
CR457247-1|CAG33528.1| 161|Homo sapiens FLJ20625 protein. 43 6e-04
Z96050-2|CAI19034.1| 1254|Homo sapiens chromosome 1 open reading... 35 0.20
Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading... 35 0.20
Z94054-2|CAI19460.1| 1254|Homo sapiens chromosome 1 open reading... 35 0.20
Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading... 35 0.20
AL035291-1|CAA22894.1| 1254|Homo sapiens hypothetical protein pr... 35 0.20
AJ250075-1|CAB57360.1| 1254|Homo sapiens hypothetical protein pr... 35 0.20
AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1 pr... 34 0.26
BC028195-1|AAH28195.1| 182|Homo sapiens chromosome 12 open read... 29 7.5
BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2 pr... 29 9.9
AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding fact... 29 9.9
AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein co... 29 9.9
AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein co... 29 9.9
AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding prot... 29 9.9
AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein co... 29 9.9
>BC001706-1|AAH01706.1| 161|Homo sapiens chromosome 11 open reading
frame 59 protein.
Length = 161
Score = 46.8 bits (106), Expect = 5e-05
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 86 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPVVSA--STPPRKPDEQTALNRI 259
MGCCYS ++D+D ER LL+ + + L S P + DEQ L+ I
Sbjct: 1 MGCCYSSENEDSDQDRE---ERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSI 57
Query: 260 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 439
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 440 LLSCPPIPAADKELISGAVRRAAAAIS 520
+L+ PIP +D + +S A +A+S
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALS 144
>AK000632-1|BAA91297.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ20625 fis, clone KAT04008. ).
Length = 161
Score = 46.8 bits (106), Expect = 5e-05
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 86 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPVVSA--STPPRKPDEQTALNRI 259
MGCCYS ++D+D ER LL+ + + L S P + DEQ L+ I
Sbjct: 1 MGCCYSSENEDSDQDRE---ERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSI 57
Query: 260 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 439
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 440 LLSCPPIPAADKELISGAVRRAAAAIS 520
+L+ PIP +D + +S A +A+S
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALS 144
>CR457247-1|CAG33528.1| 161|Homo sapiens FLJ20625 protein.
Length = 161
Score = 43.2 bits (97), Expect = 6e-04
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Frame = +2
Query: 86 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETL--VPVVSASTPPRKPDEQTALNRI 259
MGCCYS ++D+D ER LL+ + + L S P + D Q L+ I
Sbjct: 1 MGCCYSSENEDSDQDR---EERKLLLDPSSPPTKALNGAEPNYHSLPSARTDVQALLSSI 57
Query: 260 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 439
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVPAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 440 LLSCPPIPAADKELISGAVRRAAAAIS 520
+L+ PIP +D + +S A +A+S
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALS 144
>Z96050-2|CAI19034.1| 1254|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 283
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 284 IDVGAL 301
+D +L
Sbjct: 857 VDSSSL 862
>Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1406
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 283
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 949 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 1008
Query: 284 IDVGAL 301
+D +L
Sbjct: 1009 VDSSSL 1014
>Z94054-2|CAI19460.1| 1254|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 283
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 284 IDVGAL 301
+D +L
Sbjct: 857 VDSSSL 862
>Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1406
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 283
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 949 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 1008
Query: 284 IDVGAL 301
+D +L
Sbjct: 1009 VDSSSL 1014
>AL035291-1|CAA22894.1| 1254|Homo sapiens hypothetical protein
protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 283
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 284 IDVGAL 301
+D +L
Sbjct: 857 VDSSSL 862
>AJ250075-1|CAB57360.1| 1254|Homo sapiens hypothetical protein
protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 283
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 284 IDVGAL 301
+D +L
Sbjct: 857 VDSSSL 862
>AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1
protein.
Length = 1405
Score = 34.3 bits (75), Expect = 0.26
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 283
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 948 NKVNELMDNIIKEDMNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 1007
Query: 284 IDVGAL 301
+D +L
Sbjct: 1008 VDSSSL 1013
>BC028195-1|AAH28195.1| 182|Homo sapiens chromosome 12 open reading
frame 33 protein.
Length = 182
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 332 CTRWPLACTGPARPRRSHY 276
C RWP C GP RSH+
Sbjct: 7 CARWPHRCPGPQSGPRSHF 25
>BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2
protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 109 PQRQRPTGERYKRKD-TSTRSNGAATGDAGTCGISVHTT 222
P RQ PT +R KRK+ TS+ SN +A +A + G TT
Sbjct: 249 PTRQ-PTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTT 286
>AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding factor
CLIM1 protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 109 PQRQRPTGERYKRKD-TSTRSNGAATGDAGTCGISVHTT 222
P RQ PT +R KRK+ TS+ SN +A +A + G TT
Sbjct: 249 PTRQ-PTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTT 286
>AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 331
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 109 PQRQRPTGERYKRKD-TSTRSNGAATGDAGTCGISVHTT 222
P RQ PT +R KRK+ TS+ SN +A +A + G TT
Sbjct: 249 PTRQ-PTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTT 286
>AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 109 PQRQRPTGERYKRKD-TSTRSNGAATGDAGTCGISVHTT 222
P RQ PT +R KRK+ TS+ SN +A +A + G TT
Sbjct: 249 PTRQ-PTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTT 286
>AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding protein
protein.
Length = 347
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 109 PQRQRPTGERYKRKD-TSTRSNGAATGDAGTCGISVHTT 222
P RQ PT +R KRK+ TS+ SN +A +A + G TT
Sbjct: 225 PTRQ-PTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTT 262
>AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 109 PQRQRPTGERYKRKD-TSTRSNGAATGDAGTCGISVHTT 222
P RQ PT +R KRK+ TS+ SN +A +A + G TT
Sbjct: 249 PTRQ-PTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTT 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,055,673
Number of Sequences: 237096
Number of extensions: 1183751
Number of successful extensions: 7229
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7227
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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