Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320C02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ...    36   0.023
AC084197-20|AAG23472.1|  270|Caenorhabditis elegans Hypothetical...    31   0.66 
U46668-3|AAA93346.1|  205|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical...    28   3.5  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    27   6.2  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81038-17|CAB76409.1|  381|Caenorhabditis elegans Hypothetical p...    27   8.1  
AL032656-5|CAB76732.1|  381|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
           protein F28H6.4 protein.
          Length = 1000

 Score = 35.5 bits (78), Expect = 0.023
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +1

Query: 73  KNSRNGXXXXXXPQRQRPTGERYKRKDTSTRSNGAATGDAGTCGISVHTTE 225
           + S+N       PQ+ RP G  YK K    RSNG+ATG +     +++T E
Sbjct: 530 ETSKNSIKYPYVPQQSRPRGY-YKMKKLPARSNGSATGSSNDELSAIYTHE 579


>AC084197-20|AAG23472.1|  270|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.16 protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +2

Query: 119 NDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALNRILHETANNV 283
           NDPQ   I E+ H      +  E  +  +  + P  K +EQT ++  L E   N+
Sbjct: 93  NDPQSAKIIEKAHFAADLRKLGENSIYAIIENVPDCKKEEQTTIDASLMENLANL 147


>U46668-3|AAA93346.1|  205|Caenorhabditis elegans Hypothetical
           protein F38E9.4 protein.
          Length = 205

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 119 NDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALNRILHE 268
           NDPQ   I E+ H      +  E  +  +  + P  K +EQT ++  L E
Sbjct: 93  NDPQSVKIIEKAHFAADLRKLGENSIYAIIENVPDCKKEEQTTIDASLME 142


>AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical
           protein Y54G2A.13 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +2

Query: 119 NDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTA 247
           N    N  NE T   E T   Q    PV + +T P+KPD   A
Sbjct: 259 NPTTSNQKNETTD--EATSSPQSAKTPVTNPTTSPQKPDTTEA 299


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
           protein R11G1.1 protein.
          Length = 1656

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +2

Query: 119 NDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALNRILHETANNVID 289
           N P E  I E+T L   T   Q T +      TP     + T+  +I+H   N V++
Sbjct: 496 NPPHEGFIEEKTLLTPSTNNAQTTQID--RNLTPKTTTLKATSRTKIIHVGPNGVVE 550


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 116  DNDPQENVINERTHLLEVTEQQQETLVPVVSASTPP 223
            D   + N    +   LEV +Q Q+++    S+STPP
Sbjct: 999  DGKRRNNTTKRKFDALEVVQQMQKSISVAQSSSTPP 1034


>Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical
           protein T28D6.7 protein.
          Length = 322

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +2

Query: 92  CCYSICHKDNDPQENVINERTHLLE---VTEQQQETLVPVVSASTPPRKPDEQTALNRIL 262
           C +S+CH+D  P +  I   T L+    + E++Q   V  +S S P  K      +NR+ 
Sbjct: 183 CSHSVCHEDYPPAKGCI-RATVLISGYLIKEKEQGCEVIYISHSDPKGKL-PTWLVNRVT 240

Query: 263 HETANNVI 286
              A  VI
Sbjct: 241 KVVAPKVI 248


>Z81038-17|CAB76409.1|  381|Caenorhabditis elegans Hypothetical
           protein Y106G6E.1 protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 104 ICHKDNDPQENVINERTHLLEVTE 175
           ICH+D  PQ  + N  T LL++++
Sbjct: 148 ICHRDIKPQNLLYNAETGLLKISD 171


>AL032656-5|CAB76732.1|  381|Caenorhabditis elegans Hypothetical
           protein Y106G6E.1 protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 104 ICHKDNDPQENVINERTHLLEVTE 175
           ICH+D  PQ  + N  T LL++++
Sbjct: 148 ICHRDIKPQNLLYNAETGLLKISD 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,047,717
Number of Sequences: 27780
Number of extensions: 171616
Number of successful extensions: 742
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)