Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320C01f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 30 0.014
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 5.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 5.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 6.6
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 6.6
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.7
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 29.9 bits (64), Expect = 0.014
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 208 ANSGLVQICKMAQVYPHPAPEGCTSASSESAPSDQPIYPDTG 333
A GL + ++ VYP+ C + E++ SD P +P G
Sbjct: 178 ARHGLETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 1.6
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 250 YPHP--APEGCTSASSESAPSDQPIYPDTG 333
YP+P +PE A+S PS P+ P G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 1.6
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 250 YPHP--APEGCTSASSESAPSDQPIYPDTG 333
YP+P +PE A+S PS P+ P G
Sbjct: 64 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 202 ALTNGKVLWPLLEER 158
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 202 ALTNGKVLWPLLEER 158
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 202 ALTNGKVLWPLLEER 158
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 202 ALTNGKVLWPLLEER 158
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 457 TKEAQHHPIRHKHSHQA 507
TK HH I+ +H HQ+
Sbjct: 101 TKFNPHHEIKLQHLHQS 117
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 283 ASSESAPSDQPIYPD 327
ASS APS P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 450 SLHQRGPTPSDPAQTQSPS 506
++HQ+GP P Q P+
Sbjct: 197 NMHQQGPPHQQPPIQQQPN 215
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 450 SLHQRGPTPSDPAQTQSPS 506
++HQ+GP P Q P+
Sbjct: 199 NMHQQGPPHQQPPIQQQPN 217
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 496 CVCAGSDG 473
CVCAGS G
Sbjct: 920 CVCAGSTG 927
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,304
Number of Sequences: 336
Number of extensions: 2129
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -