Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320C01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   161   7e-40
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   161   7e-40
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   161   7e-40
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   161   7e-40
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   161   7e-40
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot...    30   1.7  
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro...    30   1.7  
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot...    30   1.7  
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P...    30   1.7  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  161 bits (390), Expect = 7e-40
 Identities = 76/122 (62%), Positives = 89/122 (72%)
 Frame = +2

Query: 155 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 334
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 335 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 514
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 515 KK 520
           +K
Sbjct: 154 QK 155


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  161 bits (390), Expect = 7e-40
 Identities = 76/122 (62%), Positives = 89/122 (72%)
 Frame = +2

Query: 155 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 334
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 335 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 514
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 515 KK 520
           +K
Sbjct: 154 QK 155


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  161 bits (390), Expect = 7e-40
 Identities = 76/122 (62%), Positives = 89/122 (72%)
 Frame = +2

Query: 155 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 334
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 335 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 514
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 515 KK 520
           +K
Sbjct: 154 QK 155


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  161 bits (390), Expect = 7e-40
 Identities = 76/122 (62%), Positives = 89/122 (72%)
 Frame = +2

Query: 155 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 334
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 335 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 514
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 515 KK 520
           +K
Sbjct: 154 QK 155


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  161 bits (390), Expect = 7e-40
 Identities = 76/122 (62%), Positives = 89/122 (72%)
 Frame = +2

Query: 155 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 334
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 335 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 514
           KTTA  LFK+LEKYRPE+                         +P+ + +GTNTVTKL+E
Sbjct: 94  KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153

Query: 515 KK 520
           +K
Sbjct: 154 QK 155


>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234
           protein.
          Length = 1228

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -2

Query: 358 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 212
           +KA  C+  +CL ++ +R+G  QT  +  LL L + + L   Y++ Q+P+
Sbjct: 256 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 303


>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p
           protein.
          Length = 1241

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -2

Query: 358 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 212
           +KA  C+  +CL ++ +R+G  QT  +  LL L + + L   Y++ Q+P+
Sbjct: 263 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310


>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21
           protein.
          Length = 1241

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -2

Query: 358 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 212
           +KA  C+  +CL ++ +R+G  QT  +  LL L + + L   Y++ Q+P+
Sbjct: 263 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310


>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
           protein.
          Length = 1241

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -2

Query: 358 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 212
           +KA  C+  +CL ++ +R+G  QT  +  LL L + + L   Y++ Q+P+
Sbjct: 263 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,636,128
Number of Sequences: 53049
Number of extensions: 424200
Number of successful extensions: 1613
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)