Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320B12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 215 2e-56
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 215 2e-56
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 211 2e-55
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 210 4e-55
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 209 9e-55
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 208 3e-54
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 135 6e-39
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 104 4e-23
06_03_0384 + 20174441-20175788,20176215-20176858 31 0.56
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 29 2.3
01_01_0181 - 1548392-1548466,1548689-1549379,1549475-1549604,154... 29 2.3
12_01_0599 - 4892146-4893552 28 5.2
04_04_0295 - 24212526-24212684,24213066-24213218,24213497-242136... 27 6.9
12_01_0524 - 4167867-4168445 27 9.1
08_02_0646 + 19676133-19677581 27 9.1
08_01_0667 + 5755324-5755460,5755648-5755828 27 9.1
05_01_0379 + 2975701-2976831 27 9.1
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 215 bits (525), Expect = 2e-56
Identities = 103/131 (78%), Positives = 111/131 (84%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDYHRYLAEF +G +RKEAAEN+LVAYK+A DIA+ +LP THPIRLGLALNFSVFYY
Sbjct: 129 KMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYY 188
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGESA 363
EILNSPDRAC LAK AFDDAIAELDTL EESYKDSTLIMQLLRDNLTLWTSD DG
Sbjct: 189 EILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDE 248
Query: 364 DAEQKEPAQDG 396
E +P +G
Sbjct: 249 IKEAAKPEGEG 259
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 215 bits (524), Expect = 2e-56
Identities = 102/133 (76%), Positives = 117/133 (87%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ ELPPTHPIRLGLALNFSVFYY
Sbjct: 130 KMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYY 189
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGESA 363
EILNSPDRAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+ D +A
Sbjct: 190 EILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISED--TA 247
Query: 364 DAEQKEPAQDGED 402
+ ++ P +D +
Sbjct: 248 EEIREAPKRDSSE 260
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 211 bits (516), Expect = 2e-55
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 2/128 (1%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDYHRYLAEF TG +RK+AA+ +L AY+AA DIAM EL PTHPIRLGLALNFSVFYY
Sbjct: 134 KMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYY 193
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDG--E 357
EILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSDMQ DG E
Sbjct: 194 EILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDE 253
Query: 358 SADAEQKE 381
DA + E
Sbjct: 254 MRDATKPE 261
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 210 bits (514), Expect = 4e-55
Identities = 98/113 (86%), Positives = 107/113 (94%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ ELPPTHPIRLGLALNFSVFYY
Sbjct: 348 KMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYY 407
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 342
EILNSPDRAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+
Sbjct: 408 EILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 460
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 209 bits (511), Expect = 9e-55
Identities = 100/133 (75%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDYHRYLAEF TG +RKEAAE+++VAYKAA DIA+ +L PTHPIRLGLALNFSVFYY
Sbjct: 124 KMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYY 183
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGD-GES 360
EILNSPD+AC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ D G+
Sbjct: 184 EILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDE 243
Query: 361 ADAEQKEPAQDGE 399
K A +G+
Sbjct: 244 VKEASKGDACEGQ 256
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 208 bits (507), Expect = 3e-54
Identities = 97/132 (73%), Positives = 111/132 (84%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDYHRYLAEF +G++RK+AAE+++ AYKAA DIA+ +L PTHPIRLGLALNFSVFYY
Sbjct: 107 KMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYY 166
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGESA 363
EILNSPDRAC LAK AFD+AI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD DG
Sbjct: 167 EILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDE 226
Query: 364 DAEQKEPAQDGE 399
E P + G+
Sbjct: 227 IKEAAAPKEPGD 238
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 135 bits (326), Expect(2) = 6e-39
Identities = 66/92 (71%), Positives = 75/92 (81%)
Frame = +1
Query: 82 LVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDT 261
LV Y AS A T+L PT PIRLGLALN SVFY EI+NSPD+AC+LAK AFD+A+AEL +
Sbjct: 141 LVVY-TASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPS 199
Query: 262 LSEESYKDSTLIMQLLRDNLTLWTSDMQGDGE 357
LSEE+YKDSTLIMQLLRDNL LW SDM D +
Sbjct: 200 LSEENYKDSTLIMQLLRDNLALWNSDMADDAD 231
Score = 43.2 bits (97), Expect(2) = 6e-39
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 10 KGDYHRYLAEFATGNDRKEAAENSLVAYKA 99
KGDY+RYLAEF TG ++ E +E SL AY+A
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYEA 114
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 104 bits (250), Expect = 4e-23
Identities = 58/122 (47%), Positives = 79/122 (64%)
Frame = +1
Query: 1 YKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFY 180
YKMKGDY+RYLAEF+TG ++K A + SL+AY+A A FS+
Sbjct: 120 YKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQAWP----------------CAQLFSLL- 162
Query: 181 YEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGES 360
EI+NSP+RA ++AK A D+A AE+++ E YKDS L+MQLL++NL LWTS++ G S
Sbjct: 163 -EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSELTGGETS 221
Query: 361 AD 366
D
Sbjct: 222 KD 223
>06_03_0384 + 20174441-20175788,20176215-20176858
Length = 663
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 1 YKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLA 159
Y KGD HR+L E G E + A ++++ P H I LG+A
Sbjct: 459 YMEKGDLHRWLHELPAGRPDMEDDTGGDIWEVAEDKRSISDWPTRHRIALGIA 511
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +1
Query: 55 DRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 234
D ++ E ++ K + A L R AL S + E+ ++ RL +
Sbjct: 987 DGEKPDEGKVLREKDTEENAKNALGVEQIERQDKALTESCIH-EVEQVDGQSERLTRTGV 1045
Query: 235 DDAIAELDTLSEESYKDSTLIMQLLRDN--LTLWTSDMQGDGESADAEQKEPAQDGEDQD 408
++ AE+ E + + + + N + T+ +Q +GE +A K+ A+ +QD
Sbjct: 1046 EEKHAEITQEQENEFDNGVMETSKVSVNGAMPYSTASIQSEGEQKEASDKDMAEKQSNQD 1105
Query: 409 V 411
+
Sbjct: 1106 I 1106
>01_01_0181 -
1548392-1548466,1548689-1549379,1549475-1549604,
1549704-1549884
Length = 358
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 419 HYETSWSSPSCAGSFCSASADSPSPCMSEV 330
H + S S+ + AGS +A+A P PC SE+
Sbjct: 214 HIDPSPSTSTSAGSTAAAAAFQPLPCFSEL 243
>12_01_0599 - 4892146-4893552
Length = 468
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 146 RMGWVGGSSVMAMSEAALYATSEFSAASLRSLPVANSAR 30
++GWVGG +VM + Y T+ A R+ AR
Sbjct: 59 QLGWVGGPAVMVVFGGVTYFTATLQAECYRTGDEETGAR 97
>04_04_0295 -
24212526-24212684,24213066-24213218,24213497-24213601,
24213694-24213913,24214033-24214199,24214323-24214497,
24214627-24214799,24214914-24214983,24215401-24215900
Length = 573
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 249 GDGVVEGGLGEPAGAVRAVQDLVVEHGEVERESE 148
G V+ GL E VRA+ ++V GE+ R E
Sbjct: 27 GGVVLPAGLSEEEARVRAIAEIVSAMGELSRRGE 60
>12_01_0524 - 4167867-4168445
Length = 192
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -3
Query: 261 RVQFGDGVVEGGLGEPAGAVRAVQDLVVEHGEVERESE 148
RV FGD V LGE A + VVE E E E E
Sbjct: 137 RVHFGDSTV---LGEKAAGAGGGEPAVVEEVEEEEEKE 171
>08_02_0646 + 19676133-19677581
Length = 482
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = -3
Query: 318 VVPQQLHDERGVLVAL--LRERVQFGDG-----VVEGGLGEPAGAVRAVQDL 184
VVP + +G A+ ++++V DG VV+G EPAGAV+A + L
Sbjct: 58 VVPPPVKKAKGAAAAVGKIKKKVVGVDGKNQTKVVKGKKSEPAGAVKATKKL 109
>08_01_0667 + 5755324-5755460,5755648-5755828
Length = 105
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 127 PPTHPIRLGLALNFSVFYYEI 189
PP HP RLG + F F+YEI
Sbjct: 84 PPAHPCRLGASEAF-YFFYEI 103
>05_01_0379 + 2975701-2976831
Length = 376
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 343 QGDGESADAEQKEPAQDGEDQDVS 414
+GDG + E++EP DGE++ S
Sbjct: 54 EGDGGEEEEEEEEPDGDGEEESQS 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,727,471
Number of Sequences: 37544
Number of extensions: 164164
Number of successful extensions: 882
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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