Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320B12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 185 1e-47
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 179 1e-45
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 179 1e-45
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 111 2e-25
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 78 3e-15
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 29 1.5
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 2.0
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 29 2.0
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 29 2.0
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 29 2.7
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 29 2.7
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 2.7
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 2.7
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 2.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 2.7
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 2.7
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 2.7
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 2.7
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 2.7
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 29 2.7
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 29 2.7
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 27 6.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 27 8.1
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 27 8.1
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 185 bits (451), Expect = 1e-47
Identities = 87/121 (71%), Positives = 101/121 (83%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++ PTHPIRLGLALNFSVF+Y
Sbjct: 122 KMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFY 181
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGESA 363
EILN+PD+AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD D A
Sbjct: 182 EILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATDDTDA 241
Query: 364 D 366
+
Sbjct: 242 N 242
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 179 bits (436), Expect = 1e-45
Identities = 86/125 (68%), Positives = 101/125 (80%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDY+RYLAE A+ DR E S AY+ A DIA ++ PTHPIRLGLALNFSVFYY
Sbjct: 122 KMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYY 180
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGESA 363
EILN+P+ AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ + +
Sbjct: 181 EILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDVGAEDQEQ 240
Query: 364 DAEQK 378
+ Q+
Sbjct: 241 EGNQE 245
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 179 bits (436), Expect = 1e-45
Identities = 86/125 (68%), Positives = 101/125 (80%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDY+RYLAE A+ DR E S AY+ A DIA ++ PTHPIRLGLALNFSVFYY
Sbjct: 122 KMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYY 180
Query: 184 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGESA 363
EILN+P+ AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ + +
Sbjct: 181 EILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDVGAEDQEQ 240
Query: 364 DAEQK 378
+ Q+
Sbjct: 241 EGNQE 245
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 111 bits (268), Expect = 2e-25
Identities = 50/74 (67%), Positives = 61/74 (82%)
Frame = +1
Query: 4 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 183
KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++ PTHPIRLGLALNFSVF+Y
Sbjct: 122 KMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFY 181
Query: 184 EILNSPDRACRLAK 225
EILN+PD+AC+LAK
Sbjct: 182 EILNAPDKACQLAK 195
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 78.2 bits (184), Expect = 3e-15
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +1
Query: 7 MKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYE 186
M D+ RYL ++ N R+E A S +AY+ A IA ++ PTHPIRLGLALN S ++
Sbjct: 1 MVADHFRYLVQYDDIN-REEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFD 59
Query: 187 ILNSPDRACRLAKAAFDDAIAELDTL--SEESYKDSTLIMQLLRDNLTLWTSDMQGDGES 360
+LN P A +A++A D A EL+ + S +SY S L +L T + + DG+
Sbjct: 60 VLNLPKEANEIAQSALDSAHRELEKMKSSLDSYDISNLKRARTLYDLLKSTHEQRVDGKE 119
Query: 361 AD 366
+
Sbjct: 120 GE 121
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 229 AFDDAIAELDTLSEESYKDSTLIM-----QLLRDNL-TLWTSDMQGDGESADAEQKEPAQ 390
A D+A DTL +ES+K +LI Q RD L + T+DM G+ S +K+PA
Sbjct: 352 AIDNAKKLRDTLRKESFKQKSLIFDKGFWQRNRDKLRNMITADMTGN-ISRVLTRKKPAP 410
Query: 391 DGEDQD 408
E+ D
Sbjct: 411 KLEESD 416
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 268 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 408
E+ Y+D T D + W S + + AE++E +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 124 LPPTHPIRLGLALNFSVFYYEILNSPDRACR--LAKAAFDDAIAELDTLSEESYK 282
+PP H R +A + SV Y+ PDR+ L D+ E D LSEE +K
Sbjct: 476 IPPLHYQRPAVAPSDSVSCYDEPTQPDRSLEDVLYGDLGDEYRVESDELSEEKFK 530
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 124 LPPTHPIRLGLALNFSVFYYEILNSPDRACR--LAKAAFDDAIAELDTLSEESYK 282
+PP H R +A + SV Y+ PDR+ L D+ E D LSEE +K
Sbjct: 478 IPPLHYQRPAVAPSDSVSCYDEPTQPDRSLEDVLYGDLGDEYRVESDELSEEKFK 532
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 268 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 408
E+ Y+D T D + W S + + AE++E +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 268 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 408
E+ Y+D T D + W S + + AE++E +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 413 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 461
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 523 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 571
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 530 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 578
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 201
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 603 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 651
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 288 GVLVALLRERVQFGDGVVEGGLGEPAGAVRAVQDLVV 178
GVLV L R+ GD VEGG+ A+ V +LV+
Sbjct: 136 GVLVVLAIMRIVSGDYEVEGGIMALTAALGVVVNLVM 172
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 223 KAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 333
K FD I E+D + ES+ + I+Q++ ++ L+T
Sbjct: 223 KCPFDRKIIEMDGRNVESFPKNYTILQMVTHSINLYT 259
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 331 TSDMQGDGESADAEQKEPAQDGEDQD 408
+SD + D ES D+E+ E + +D+D
Sbjct: 421 SSDEESDEESEDSEESEESSSDDDED 446
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 331 TSDMQGDGESADAEQKEPAQDGEDQD 408
+SD + D ES D+E+ E + +D+D
Sbjct: 421 SSDEESDEESEDSEESEESSSDDDED 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,345,666
Number of Sequences: 27780
Number of extensions: 113590
Number of successful extensions: 589
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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