Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320B08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-327|AAF51973.2|  648|Drosophila melanogaster CG2179-PB,...    32   0.41 
AE014297-326|AAF51972.2|  783|Drosophila melanogaster CG2179-PA,...    32   0.41 
AE014297-542|AAF54076.2|  428|Drosophila melanogaster CG1988-PA,...    30   1.7  
AE014297-541|AAO41513.1|  578|Drosophila melanogaster CG1988-PB,...    30   1.7  
X52454-1|CAA36692.1|  355|Drosophila melanogaster rho protein.         28   6.7  
BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p pro...    28   6.7  
AY121641-1|AAM51968.1|  355|Drosophila melanogaster LD06131p pro...    28   6.7  
AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA...    28   6.7  
AE014296-252|AAF47496.1|  355|Drosophila melanogaster CG1004-PA ...    28   6.7  

>AE014297-327|AAF51973.2|  648|Drosophila melanogaster CG2179-PB,
           isoform B protein.
          Length = 648

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 310 QQNSGSMPKTNAEKCREYRQRQKEKNMKKKAKFRNVADTRKV 435
           +Q    + K  AEK RE  +R+KEK+MKK  +   V  ++K+
Sbjct: 172 RQKQEELKKAEAEKQREREERRKEKHMKKIQERGQVEISQKI 213


>AE014297-326|AAF51972.2|  783|Drosophila melanogaster CG2179-PA,
           isoform A protein.
          Length = 783

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 310 QQNSGSMPKTNAEKCREYRQRQKEKNMKKKAKFRNVADTRKV 435
           +Q    + K  AEK RE  +R+KEK+MKK  +   V  ++K+
Sbjct: 307 RQKQEELKKAEAEKQREREERRKEKHMKKIQERGQVEISQKI 348


>AE014297-542|AAF54076.2|  428|Drosophila melanogaster CG1988-PA,
           isoform A protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
 Frame = +1

Query: 160 KRNKNKSKKIYYVHT*DFRENKD*KAGKEKSKIAVVYFSPETVL*AFRPFQQN---SGSM 330
           K+ K + KK+  +     +  KD KA KEK++           L A R  +Q+   + S 
Sbjct: 210 KQMKEQCKKMAAIQKCRKQAKKD-KANKEKAECEKAAKLEADRLKALREAEQDRKKAESA 268

Query: 331 PKTNAEKCREYRQRQKEKNMK--KKAKFRNVADTRKVAKSS 447
            K     C++  ++QK K +    K KF+  A  +K A  S
Sbjct: 269 EKAKKAMCKKINKQQKPKEVDVCAKYKFKEAAQVKKNASKS 309


>AE014297-541|AAO41513.1|  578|Drosophila melanogaster CG1988-PB,
           isoform B protein.
          Length = 578

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
 Frame = +1

Query: 160 KRNKNKSKKIYYVHT*DFRENKD*KAGKEKSKIAVVYFSPETVL*AFRPFQQN---SGSM 330
           K+ K + KK+  +     +  KD KA KEK++           L A R  +Q+   + S 
Sbjct: 360 KQMKEQCKKMAAIQKCRKQAKKD-KANKEKAECEKAAKLEADRLKALREAEQDRKKAESA 418

Query: 331 PKTNAEKCREYRQRQKEKNMK--KKAKFRNVADTRKVAKSS 447
            K     C++  ++QK K +    K KF+  A  +K A  S
Sbjct: 419 EKAKKAMCKKINKQQKPKEVDVCAKYKFKEAAQVKKNASKS 459


>X52454-1|CAA36692.1|  355|Drosophila melanogaster rho protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 469 GIPVPVPLNFLRLYEYLRHSEILLFFSY 386
           G+PVP+P + + +Y   R  ++  FFSY
Sbjct: 129 GLPVPIPSDSVLVYRPDRRLQVWRFFSY 156


>BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p
           protein.
          Length = 1203

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 301 RPFQQNSGSMPKTNAEKCREYR-QRQKEKNMKKK 399
           RP +  S SMP    E+ R YR + +K+K +++K
Sbjct: 830 RPSETGSRSMPSDEDEETRNYRLEIEKQKQLREK 863


>AY121641-1|AAM51968.1|  355|Drosophila melanogaster LD06131p
           protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 469 GIPVPVPLNFLRLYEYLRHSEILLFFSY 386
           G+PVP+P + + +Y   R  ++  FFSY
Sbjct: 129 GLPVPIPSDSVLVYRPDRRLQVWRFFSY 156


>AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA
           protein.
          Length = 1128

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 301 RPFQQNSGSMPKTNAEKCREYR-QRQKEKNMKKK 399
           RP +  S SMP    E+ R YR + +K+K +++K
Sbjct: 755 RPSETGSRSMPSDEDEETRNYRLEIEKQKQLREK 788


>AE014296-252|AAF47496.1|  355|Drosophila melanogaster CG1004-PA
           protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 469 GIPVPVPLNFLRLYEYLRHSEILLFFSY 386
           G+PVP+P + + +Y   R  ++  FFSY
Sbjct: 129 GLPVPIPSDSVLVYRPDRRLQVWRFFSY 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,114,372
Number of Sequences: 53049
Number of extensions: 302058
Number of successful extensions: 995
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)