Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320B08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80029-13|AAB37592.2|  429|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z70204-1|CAA94111.1|  643|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U80029-13|AAB37592.2|  429|Caenorhabditis elegans Hypothetical
           protein T20D4.5 protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 118 INLNKPFRQSTTKWQFLVKNKVKNFEK 38
           I    P+R+S   W F ++NK +N EK
Sbjct: 333 IGQEAPYRRSNIYWMFDLRNKGRNVEK 359


>Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 313 QNSGSMPKTNAEKCREYRQRQKEKNMKKKAKFRNVADTRKVAKSSTE 453
           +  G    T  E  ++  QR + KN+ + A+F+ + D+R  AK   E
Sbjct: 113 EREGKSGLTQDEITKQTSQRIR-KNLHEAAEFKRIRDSRAAAKEDME 158


>Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 313 QNSGSMPKTNAEKCREYRQRQKEKNMKKKAKFRNVADTRKVAKSSTE 453
           +  G    T  E  ++  QR + KN+ + A+F+ + D+R  AK   E
Sbjct: 113 EREGKSGLTQDEITKQTSQRIR-KNLHEAAEFKRIRDSRAAAKEDME 158


>Z70204-1|CAA94111.1|  643|Caenorhabditis elegans Hypothetical
           protein C11G6.1 protein.
          Length = 643

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/37 (27%), Positives = 24/37 (64%)
 Frame = +1

Query: 340 NAEKCREYRQRQKEKNMKKKAKFRNVADTRKVAKSST 450
           ++E+ +EY++ +KEK  K++ + ++  +  K+ K  T
Sbjct: 587 SSEEYKEYKRLKKEKRRKEREERKSAENCVKIEKEKT 623


>AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical
           protein W01B11.3 protein.
          Length = 487

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 310 QQNSGSMPKTNAEKCREYRQRQKEKNMKKKAKFRNVADT 426
           ++++ ++ K   E+ +E  + + EK  KKK K    ADT
Sbjct: 444 EESTNAIKKMKIEEVKEEDEAEPEKKKKKKEKKAKKADT 482


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,808,542
Number of Sequences: 27780
Number of extensions: 171787
Number of successful extensions: 625
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)