Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320B08f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.36
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 25 0.36
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 25 0.62
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 25 0.62
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 1.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 1.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 3.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 4.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 4.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 4.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 4.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 5.8
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 7.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 7.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 7.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 7.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 7.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 7.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 7.7
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.36
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRNVADTRKVAKS 444
N ++ R+YR+R KE++ K+ + R + RK+ S
Sbjct: 52 NEKEYRKYRERSKERSRDKRERER--SKERKIISS 84
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.36
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRNVADTRKVAKS 444
N ++ R+YR+R KE++ K+ + R + RK+ S
Sbjct: 52 NEKEYRKYRERSKERSRDKRERER--SKERKIISS 84
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 24.6 bits (51), Expect = 0.62
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 379 EKNMKKKAKFRNVADTRKVAKSST 450
EKNM+++AK NVA R +T
Sbjct: 247 EKNMREQAKKMNVASLRSSENQNT 270
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 24.6 bits (51), Expect = 0.62
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 379 EKNMKKKAKFRNVADTRKVAKSST 450
EKNM+++AK NVA R +T
Sbjct: 123 EKNMREQAKKMNVASLRSSENQNT 146
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N K R+YR+R KE++ + + R+
Sbjct: 52 NERKYRKYRERSKERSRDRTERERS 76
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N K R+YR+R KE++ + + R+
Sbjct: 52 NERKYRKYRERSKERSRDRTERERS 76
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+R KE++ + + R+
Sbjct: 285 NEREYRKYRERSKERSRDRTERERS 309
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N R+YR+ KE++ +K + R+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERS 76
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N R+YR+ KE++ +K + R+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERS 76
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N R+YR+ KE++ +K + R+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERS 76
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N R+YR+ KE++ +K + R+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERS 76
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N R+YR+ KE++ +K + R+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERS 76
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N R+YR+ KE++ +K + R+
Sbjct: 285 NENSYRKYRETSKERSRDRKERERS 309
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N R+YR+ KE++ +K + R+
Sbjct: 285 NENSYRKYRETSKERSRDRKERERS 309
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 17 IYFKAAFLLKVFYFVFHQKLPF 82
IYF L +YF Q PF
Sbjct: 221 IYFIEDIGLNTYYFFLRQAFPF 242
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAK 405
N + R+YR+ KE++ +K +
Sbjct: 52 NEREYRKYRETSKERSRDRKER 73
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAK 405
N + R+YR+ KE++ +K +
Sbjct: 52 NEREYRKYRETSKERSRDRKER 73
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAK 405
N + R+YR+ KE++ +K +
Sbjct: 52 NEREYRKYRETSKERSRDRKER 73
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 52 NEREYRKYRETSKERSRDRRERERS 76
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRN 414
N + R+YR+ KE++ ++ + R+
Sbjct: 274 NEREYRKYRETSKERSRDRRERERS 298
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 340 NAEKCREYRQRQKEKNMKKKAKFRNVADTRKVAKS 444
N R+YR+ KE++ K + R + RK+ S
Sbjct: 290 NENSYRKYRETSKERSRDKTERER--SKERKIISS 322
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,252
Number of Sequences: 438
Number of extensions: 2381
Number of successful extensions: 30
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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