Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320B06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   7.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.7  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 496 GDGYGVGAVHGVRYANSD 443
           GDGYG G V+ +  A  D
Sbjct: 484 GDGYGAGIVYHLSKAELD 501


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 520 LNGYWVRSGDGYGVGAVHGVRYA 452
           + GY+  SG+G    A  G+ YA
Sbjct: 32  IKGYYKISGNGKQYEAYEGIPYA 54


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 520 LNGYWVRSGDGYGVGAVHGVRYA 452
           + GY+  SG+G    A  G+ YA
Sbjct: 32  IKGYYKISGNGKQYEAYEGIPYA 54


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 71  GDPEPSKTIQKRSGHLGHYADLYGHGLSSGIA 166
           GD  P      R+G L     +YG G  SG A
Sbjct: 143 GDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTA 174


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 71  GDPEPSKTIQKRSGHLGHYADLYGHGLSSGIA 166
           GD  P      R+G L     +YG G  SG A
Sbjct: 143 GDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTA 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,272
Number of Sequences: 438
Number of extensions: 1651
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)