Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320B01f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 71 3e-12
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 69 1e-11
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 31 2.4
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 30 4.3
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 30 4.3
BC120962-1|AAI20963.1| 249|Homo sapiens chromosome 1 open readi... 30 5.7
BC120961-1|AAI20962.1| 249|Homo sapiens chromosome 1 open readi... 30 5.7
BC108721-1|AAI08722.1| 249|Homo sapiens chromosome 1 open readi... 30 5.7
BC070027-1|AAH70027.1| 65|Homo sapiens C1orf77 protein protein. 30 5.7
BC059949-1|AAH59949.1| 194|Homo sapiens C1orf77 protein protein. 30 5.7
BC002733-1|AAH02733.1| 118|Homo sapiens C1orf77 protein protein. 30 5.7
AL162258-7|CAI19680.1| 223|Homo sapiens chromosome 1 open readi... 30 5.7
AL162258-6|CAI19679.1| 202|Homo sapiens chromosome 1 open readi... 30 5.7
AL162258-5|CAI19678.1| 248|Homo sapiens chromosome 1 open readi... 30 5.7
AF261137-1|AAG44673.1| 248|Homo sapiens HT031 protein. 30 5.7
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 29 7.5
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 29 7.5
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 29 7.5
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 29 7.5
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 29 7.5
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 29 7.5
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 70.5 bits (165), Expect = 3e-12
Identities = 44/99 (44%), Positives = 55/99 (55%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGI 342
ADA+KAMKQYNGVPLDGR MNIQL TS+I+ R A++ + GG RN G GG
Sbjct: 157 ADALKAMKQYNGVPLDGRPMNIQLVTSQIDAQRRPAQS----VNRGGMTRNRGAGGFGGG 212
Query: 341 RNQXXXXXXXXXXXXXXXXXXGKRPVPTAEQLDAELDAY 225
K+ + +AE+LDA+LDAY
Sbjct: 213 GGTRRGTRGGARGRGRGAGRNSKQQL-SAEELDAQLDAY 250
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 68.5 bits (160), Expect = 1e-11
Identities = 43/99 (43%), Positives = 54/99 (54%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGI 342
ADA+KAMKQYNG PLDGR MNIQL TS+I+ R A++ + GG RN G GG
Sbjct: 133 ADALKAMKQYNGFPLDGRPMNIQLVTSQIDAQRRPAQS----VNRGGMTRNRGAGGFGGG 188
Query: 341 RNQXXXXXXXXXXXXXXXXXXGKRPVPTAEQLDAELDAY 225
K+ + +AE+LDA+LDAY
Sbjct: 189 GGTRRGTRGGARGRGRGAGRNSKQQL-SAEELDAQLDAY 226
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 31.1 bits (67), Expect = 2.4
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLAT------SEINTLRPEARNR----IGGASVGGTIR 372
ADA A++ NG LDG+A+ + AT S P +R R G GG R
Sbjct: 54 ADAKAAVRDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGGGGPR 113
Query: 371 NNPKRGG 351
+P RGG
Sbjct: 114 RSPSRGG 120
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLAT------SEINTLRPEARNR----IGGASVGGTIR 372
ADA A + NG LDG+A+ + AT S P +R R G GG R
Sbjct: 60 ADAKAAARDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGGGGPR 119
Query: 371 NNPKRGG 351
+P RGG
Sbjct: 120 RSPSRGG 126
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLAT------SEINTLRPEARNR----IGGASVGGTIR 372
ADA A + NG LDG+A+ + AT S P +R R G GG R
Sbjct: 60 ADAKAAARDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGGGGPR 119
Query: 371 NNPKRGG 351
+P RGG
Sbjct: 120 RSPSRGG 126
>BC120962-1|AAI20963.1| 249|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 249
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 209 RPVLTKEQLDNQLDAYMSKTK 229
>BC120961-1|AAI20962.1| 249|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 249
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 209 RPVLTKEQLDNQLDAYMSKTK 229
>BC108721-1|AAI08722.1| 249|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 249
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 209 RPVLTKEQLDNQLDAYMSKTK 229
>BC070027-1|AAH70027.1| 65|Homo sapiens C1orf77 protein protein.
Length = 65
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 25 RPVLTKEQLDNQLDAYMSKTK 45
>BC059949-1|AAH59949.1| 194|Homo sapiens C1orf77 protein protein.
Length = 194
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 154 RPVLTKEQLDNQLDAYMSKTK 174
>BC002733-1|AAH02733.1| 118|Homo sapiens C1orf77 protein protein.
Length = 118
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 78 RPVLTKEQLDNQLDAYMSKTK 98
>AL162258-7|CAI19680.1| 223|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 223
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 183 RPVLTKEQLDNQLDAYMSKTK 203
>AL162258-6|CAI19679.1| 202|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 202
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 162 RPVLTKEQLDNQLDAYMSKTK 182
>AL162258-5|CAI19678.1| 248|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 248
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 208 RPVLTKEQLDNQLDAYMSKTK 228
>AF261137-1|AAG44673.1| 248|Homo sapiens HT031 protein.
Length = 248
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RPVPTAEQLDAELDAYVKEIK 210
RPV T EQLD +LDAY+ + K
Sbjct: 208 RPVLTKEQLDNQLDAYMSKTK 228
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVGGTI 375
ADA A + NG LDG+A+ ++ AT + R P R+R GG G
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT 119
Query: 374 RNNPKRGG 351
R P RGG
Sbjct: 120 RGPPSRGG 127
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVGGTI 375
ADA A + NG LDG+A+ ++ AT + R P R+R GG G
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT 119
Query: 374 RNNPKRGG 351
R P RGG
Sbjct: 120 RGPPSRGG 127
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVGGTI 375
ADA A + NG LDG+A+ ++ AT + R P R+R GG G
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT 119
Query: 374 RNNPKRGG 351
R P RGG
Sbjct: 120 RGPPSRGG 127
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVGGTI 375
ADA A + NG LDG+A+ ++ AT + R P R+R GG G
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT 119
Query: 374 RNNPKRGG 351
R P RGG
Sbjct: 120 RGPPSRGG 127
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVGGTI 375
ADA A + NG LDG+A+ ++ AT + R P R+R GG G
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT 119
Query: 374 RNNPKRGG 351
R P RGG
Sbjct: 120 RGPPSRGG 127
>AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ38696 fis, clone KIDNE2001931, highly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN G. ).
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVGGTI 375
ADA A + NG LDG+A+ ++ AT + R P R+R GG G
Sbjct: 47 ADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT 106
Query: 374 RNNPKRGG 351
R P RGG
Sbjct: 107 RGPPSRGG 114
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = -1
Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVGGTI 375
ADA A + NG LDG+A+ ++ AT + R P R+R GG G
Sbjct: 60 ADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT 119
Query: 374 RNNPKRGG 351
R P RGG
Sbjct: 120 RGPPSRGG 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,773,695
Number of Sequences: 237096
Number of extensions: 814349
Number of successful extensions: 1600
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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