Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320B01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF172637-1|AAD46930.1|  266|Drosophila melanogaster LD24793p pro...    79   4e-15
AE014297-550|AAF54070.1|  266|Drosophila melanogaster CG1101-PA ...    79   4e-15
X56689-1|CAA40017.1|  716|Drosophila melanogaster Protein on Ecd...    28   8.8  
AY118552-1|AAM49921.1|  693|Drosophila melanogaster LD34072p pro...    28   8.8  
AE014298-3196|AAF50942.1|  530|Drosophila melanogaster CG17599-P...    28   8.8  
AE014296-2941|AAS64975.1|  693|Drosophila melanogaster CG6143-PC...    28   8.8  
AE014296-2940|AAF49319.3|  716|Drosophila melanogaster CG6143-PB...    28   8.8  

>AF172637-1|AAD46930.1|  266|Drosophila melanogaster LD24793p
           protein.
          Length = 266

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
 Frame = -1

Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATSEINTL-RPEARNRIGGASVGGTIRNNPKRGG-- 351
           ADA+KA+KQY+GVPLDGR M IQLA S++  L RP A   +    VGGT   + KRGG  
Sbjct: 160 ADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDV-KRRVGGTAPTSFKRGGGQ 218

Query: 350 -GGIRNQXXXXXXXXXXXXXXXXXXGKRPVPTAEQLDAELDAYVKEIK 210
            GG   +                   K P PTAE+LDAELD+Y+ ++K
Sbjct: 219 AGGTARRGFKRPVGGKPAAGGQRRERKAP-PTAEELDAELDSYINDMK 265


>AE014297-550|AAF54070.1|  266|Drosophila melanogaster CG1101-PA
           protein.
          Length = 266

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
 Frame = -1

Query: 521 ADAVKAMKQYNGVPLDGRAMNIQLATSEINTL-RPEARNRIGGASVGGTIRNNPKRGG-- 351
           ADA+KA+KQY+GVPLDGR M IQLA S++  L RP A   +    VGGT   + KRGG  
Sbjct: 160 ADALKAIKQYHGVPLDGRPMTIQLAVSDVAVLTRPVAATDV-KRRVGGTAPTSFKRGGGQ 218

Query: 350 -GGIRNQXXXXXXXXXXXXXXXXXXGKRPVPTAEQLDAELDAYVKEIK 210
            GG   +                   K P PTAE+LDAELD+Y+ ++K
Sbjct: 219 AGGTARRGFKRPVGGKPAAGGQRRERKAP-PTAEELDAELDSYINDMK 265


>X56689-1|CAA40017.1|  716|Drosophila melanogaster Protein on
           Ecdysone Puffs protein.
          Length = 716

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/70 (22%), Positives = 27/70 (38%)
 Frame = -1

Query: 449 ATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIRNQXXXXXXXXXXXXXXXXXXGKR 270
           A + +N  R +        + G   +  PK+GGGGIR Q                   K 
Sbjct: 132 AGNRLNNRRGQGGGFQNRGATGSGPKPPPKQGGGGIRKQNAFDRAKKLLAKNANQNKKKE 191

Query: 269 PVPTAEQLDA 240
           P P  +++++
Sbjct: 192 PTPGEKKIES 201


>AY118552-1|AAM49921.1|  693|Drosophila melanogaster LD34072p
           protein.
          Length = 693

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/70 (22%), Positives = 27/70 (38%)
 Frame = -1

Query: 449 ATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIRNQXXXXXXXXXXXXXXXXXXGKR 270
           A + +N  R +        + G   +  PK+GGGGIR Q                   K 
Sbjct: 109 AGNRLNNRRGQGGGFQNRGATGSGPKPPPKQGGGGIRKQNAFDRAKKLLAKNANQNKKKE 168

Query: 269 PVPTAEQLDA 240
           P P  +++++
Sbjct: 169 PTPGEKKIES 178


>AE014298-3196|AAF50942.1|  530|Drosophila melanogaster CG17599-PA
           protein.
          Length = 530

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/60 (31%), Positives = 23/60 (38%)
 Frame = -1

Query: 518 DAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIR 339
           D  K M+Q N V   G+      ATS I      +R  +GG    G    N  R   G R
Sbjct: 359 DEDKLMQQNNMVSAQGKRPGT--ATSRIRPTTGRSRKAVGGRGTAGPDGGNDARAARGTR 416


>AE014296-2941|AAS64975.1|  693|Drosophila melanogaster CG6143-PC,
           isoform C protein.
          Length = 693

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/70 (22%), Positives = 27/70 (38%)
 Frame = -1

Query: 449 ATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIRNQXXXXXXXXXXXXXXXXXXGKR 270
           A + +N  R +        + G   +  PK+GGGGIR Q                   K 
Sbjct: 109 AGNRLNNRRGQGGGFQNRGATGSGPKPPPKQGGGGIRKQNAFDRAKKLLAKNANQNKKKE 168

Query: 269 PVPTAEQLDA 240
           P P  +++++
Sbjct: 169 PTPGEKKIES 178


>AE014296-2940|AAF49319.3|  716|Drosophila melanogaster CG6143-PB,
           isoform B protein.
          Length = 716

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/70 (22%), Positives = 27/70 (38%)
 Frame = -1

Query: 449 ATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIRNQXXXXXXXXXXXXXXXXXXGKR 270
           A + +N  R +        + G   +  PK+GGGGIR Q                   K 
Sbjct: 132 AGNRLNNRRGQGGGFQNRGATGSGPKPPPKQGGGGIRKQNAFDRAKKLLAKNANQNKKKE 191

Query: 269 PVPTAEQLDA 240
           P P  +++++
Sbjct: 192 PTPGEKKIES 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,254,888
Number of Sequences: 53049
Number of extensions: 282056
Number of successful extensions: 962
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)