Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320A08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 78 3e-15
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 78 3e-15
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 31 0.66
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 1.2
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 1.2
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 29 2.7
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 29 2.7
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 28 3.5
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 28 4.7
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 27 6.2
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 27 6.2
Z37140-3|CAA85500.1| 189|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 27 8.1
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 27 8.1
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 78.2 bits (184), Expect = 3e-15
Identities = 38/114 (33%), Positives = 63/114 (55%)
Frame = +2
Query: 11 DERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXXXXXGGMYAAPKIELDDTVREIRE 190
DE+YD++PEIWEGHN+AD++DP+I G Y + D+ +E +
Sbjct: 472 DEKYDIVPEIWEGHNLADFVDPEIQSKLENLLREEELLEQAGEYESDLDSDDEETKEKLK 531
Query: 191 LARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDM 352
LA QIR K+ +L + + K+ + R ++ + RS S+L ++ +LGVD+
Sbjct: 532 LALQIREKEKLLTLDHAVNKRIAGRIGSRIHGSRKRDRSMSRLENELGELGVDV 585
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 78.2 bits (184), Expect = 3e-15
Identities = 38/114 (33%), Positives = 63/114 (55%)
Frame = +2
Query: 11 DERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXXXXXGGMYAAPKIELDDTVREIRE 190
DE+YD++PEIWEGHN+AD++DP+I G Y + D+ +E +
Sbjct: 472 DEKYDIVPEIWEGHNLADFVDPEIQSKLENLLREEELLEQAGEYESDLDSDDEETKEKLK 531
Query: 191 LARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDM 352
LA QIR K+ +L + + K+ + R ++ + RS S+L ++ +LGVD+
Sbjct: 532 LALQIREKEKLLTLDHAVNKRIAGRIGSRIHGSRKRDRSMSRLENELGELGVDV 585
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 182 IRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVD 349
+ + RQ +L+ +S + + T+ + + R+K + T LRKDM++L D
Sbjct: 749 VADAKRQNDELSELLESKSTTLVEKTRSLEEQEERSKKLRAETELLRKDMQELETD 804
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 182 IRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVD 349
+ + RQ +L+ +S + + T+ + + R+K + T LRKDM++L D
Sbjct: 749 VADAKRQNDELSELLESKSTTLVEKTRSLEEQEERSKKLRAETELLRKDMQELETD 804
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 182 IRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVD 349
+ + RQ +L+ +S + + T+ + + R+K + T LRKDM++L D
Sbjct: 749 VADAKRQNDELSELLESKSTTLVEKTRSLEEQEERSKKLRAETELLRKDMQELETD 804
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical protein
F33A8.1 protein.
Length = 897
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = +1
Query: 142 RRAQDRAGRHREGDQGTRPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQ 321
R ++ +G R GD+ R + QE H + R + + D S D +
Sbjct: 819 RERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRRDRRRHDSDDDRKTRRDRS 878
Query: 322 EGHGETRR 345
E G RR
Sbjct: 879 EERGGRRR 886
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin protein.
Length = 897
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = +1
Query: 142 RRAQDRAGRHREGDQGTRPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQ 321
R ++ +G R GD+ R + QE H + R + + D S D +
Sbjct: 819 RERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRRDRRRHDSDDDRKTRRDRS 878
Query: 322 EGHGETRR 345
E G RR
Sbjct: 879 EERGGRRR 886
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 248 KQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSESG 364
+ +T+P +PRT RA TK +T + R+ + D + G
Sbjct: 332 QSATEPPIPRTKRAYTKNPNTIRKRRMKKNQSDDEEDDG 370
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 248 KQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSESG 364
+ +T+P +PRT RA TK +T + R+ + D + G
Sbjct: 373 QSATEPPIPRTKRAYTKNPNTIRKRRMKKNQSDDEEDDG 411
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 93 WQSWRRTRSCARLAACTPRPRSSWT 167
W RR SC R C+PR WT
Sbjct: 115 WLGARRKGSCPRAGICSPRDTFFWT 139
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 152 KIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKD 328
K+E RE + L + R +K LK+E+R K+ K +M K + S ++++++
Sbjct: 314 KLEKQAMKREKQRLKEEEREEKLRLKEENREKKRREKARIMELKRLEKVYRTSNARIQEN 373
Query: 329 MEK 337
EK
Sbjct: 374 HEK 376
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +1
Query: 154 DRAGRHREGDQGTRPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQEG 327
D G GD+GTR A EG G H+A D + + +V + + G
Sbjct: 137 DGGGGFVAGDEGTRHAVVDSEGTKHGAPDTEGTRHDAPDLEGTENSEGVKVTTKTRSG 194
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +1
Query: 154 DRAGRHREGDQGTRPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQEG 327
D G GD+GTR A EG G H+A D + + +V + + G
Sbjct: 188 DGGGGFVAGDEGTRHAVVDSEGTKHGAPDTEGTRHDAPDLEGTENSEGVKVTTKTRSG 245
>Z37140-3|CAA85500.1| 189|Caenorhabditis elegans Hypothetical
protein ZK899.3 protein.
Length = 189
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 141 TPRPRSSWTTP*GRSGNSPGRYATRRPSSRTSL 239
TPRPR +W P ++ + SSRT L
Sbjct: 95 TPRPRIAWAIPNAAHHKGSSKHQKQSKSSRTLL 127
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 KPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSESG 364
KPV + + +T + +LRK E++G+ S SG
Sbjct: 410 KPVFRKERKKRTHEEIQEELRKIWEEIGIKHSMSG 444
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 218 AILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRK 325
AI D+ +LV S KP + ++KTK R +SK K
Sbjct: 4 AITPDKKKLV--SPKPTKTTSDKSKTKPRRSSKTSK 37
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 218 AILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRK 325
AI D+ +LV S KP + ++KTK R +SK K
Sbjct: 4 AITPDKKKLV--SPKPTKTTSDKSKTKPRRSSKTSK 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,237,793
Number of Sequences: 27780
Number of extensions: 144769
Number of successful extensions: 492
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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