Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320A07f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51205-1|AAB38529.1|  209|Homo sapiens COP9 signalosome subunit ...   101   1e-21
CR456994-1|CAG33275.1|  209|Homo sapiens COPS8 protein.               101   1e-21
BC080617-1|AAH80617.1|  209|Homo sapiens COP9 constitutive photo...   101   1e-21
BC036499-1|AAH36499.1|  209|Homo sapiens COP9 constitutive photo...   101   1e-21
BC003090-1|AAH03090.1|  209|Homo sapiens COP9 constitutive photo...   101   1e-21
AC105760-1|AAY14978.1|  209|Homo sapiens unknown protein.             101   1e-21

>U51205-1|AAB38529.1|  209|Homo sapiens COP9 signalosome subunit 8
           CSN8 protein.
          Length = 209

 Score =  101 bits (243), Expect = 1e-21
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 273 NFDKLCADLERQELETPNGIASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQNVMSSSPEI 452
           +F KL    E QELE P GIA+P  Y QLLA+YL  ND+ NA++LWKRIP  + S++ E+
Sbjct: 12  SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71

Query: 453 VAIWAIGQKLWKKDLPGTYEAL 518
             IW++GQ++W++D PG Y  +
Sbjct: 72  GGIWSVGQRIWQRDFPGIYTTI 93


>CR456994-1|CAG33275.1|  209|Homo sapiens COPS8 protein.
          Length = 209

 Score =  101 bits (243), Expect = 1e-21
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 273 NFDKLCADLERQELETPNGIASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQNVMSSSPEI 452
           +F KL    E QELE P GIA+P  Y QLLA+YL  ND+ NA++LWKRIP  + S++ E+
Sbjct: 12  SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71

Query: 453 VAIWAIGQKLWKKDLPGTYEAL 518
             IW++GQ++W++D PG Y  +
Sbjct: 72  GGIWSVGQRIWQRDFPGIYTTI 93


>BC080617-1|AAH80617.1|  209|Homo sapiens COP9 constitutive
           photomorphogenic homolog subunit 8 (Arabidopsis)
           protein.
          Length = 209

 Score =  101 bits (243), Expect = 1e-21
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 273 NFDKLCADLERQELETPNGIASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQNVMSSSPEI 452
           +F KL    E QELE P GIA+P  Y QLLA+YL  ND+ NA++LWKRIP  + S++ E+
Sbjct: 12  SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71

Query: 453 VAIWAIGQKLWKKDLPGTYEAL 518
             IW++GQ++W++D PG Y  +
Sbjct: 72  GGIWSVGQRIWQRDFPGIYTTI 93


>BC036499-1|AAH36499.1|  209|Homo sapiens COP9 constitutive
           photomorphogenic homolog subunit 8 (Arabidopsis)
           protein.
          Length = 209

 Score =  101 bits (243), Expect = 1e-21
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 273 NFDKLCADLERQELETPNGIASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQNVMSSSPEI 452
           +F KL    E QELE P GIA+P  Y QLLA+YL  ND+ NA++LWKRIP  + S++ E+
Sbjct: 12  SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71

Query: 453 VAIWAIGQKLWKKDLPGTYEAL 518
             IW++GQ++W++D PG Y  +
Sbjct: 72  GGIWSVGQRIWQRDFPGIYTTI 93


>BC003090-1|AAH03090.1|  209|Homo sapiens COP9 constitutive
           photomorphogenic homolog subunit 8 (Arabidopsis)
           protein.
          Length = 209

 Score =  101 bits (243), Expect = 1e-21
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 273 NFDKLCADLERQELETPNGIASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQNVMSSSPEI 452
           +F KL    E QELE P GIA+P  Y QLLA+YL  ND+ NA++LWKRIP  + S++ E+
Sbjct: 12  SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71

Query: 453 VAIWAIGQKLWKKDLPGTYEAL 518
             IW++GQ++W++D PG Y  +
Sbjct: 72  GGIWSVGQRIWQRDFPGIYTTI 93


>AC105760-1|AAY14978.1|  209|Homo sapiens unknown protein.
          Length = 209

 Score =  101 bits (243), Expect = 1e-21
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 273 NFDKLCADLERQELETPNGIASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQNVMSSSPEI 452
           +F KL    E QELE P GIA+P  Y QLLA+YL  ND+ NA++LWKRIP  + S++ E+
Sbjct: 12  SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71

Query: 453 VAIWAIGQKLWKKDLPGTYEAL 518
             IW++GQ++W++D PG Y  +
Sbjct: 72  GGIWSVGQRIWQRDFPGIYTTI 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,574,302
Number of Sequences: 237096
Number of extensions: 1275817
Number of successful extensions: 2416
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2416
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)