Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320A07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical ...    29   2.7  
U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical
           protein C06A12.4 protein.
          Length = 735

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 125 FIMFYF*SGNKKFTIFNNFLLGLLNWC 205
           FI+F F   NK  T+  +F   + NWC
Sbjct: 112 FILFIFYQMNKLITVIRDFSYSVYNWC 138


>Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = -3

Query: 348 KSRDWLFHLVSQVLAFPNQHKVYRNS*SFCLYYYHATLELIRIDILIMHQLRSPNRKLLK 169
           K   WLF LV+  + F N H +++N   F + Y + +           + L++PN   ++
Sbjct: 127 KKITWLFILVAYFVPFLNTHIIFQN--KFTIDYLNES---------DSYTLQTPNMPFIE 175

Query: 168 IVNFLLP 148
           I N L+P
Sbjct: 176 IYNVLIP 182


>AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = -3

Query: 348 KSRDWLFHLVSQVLAFPNQHKVYRNS*SFCLYYYHATLELIRIDILIMHQLRSPNRKLLK 169
           K   WLF LV+  + F N H +++N   F + Y + +           + L++PN   ++
Sbjct: 127 KKITWLFILVAYFVPFLNTHIIFQN--KFTIDYLNES---------DSYTLQTPNMPFIE 175

Query: 168 IVNFLLP 148
           I N L+P
Sbjct: 176 IYNVLIP 182


>U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical
           protein F18F11.4 protein.
          Length = 550

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -3

Query: 333 LFHLVSQVLAFPNQHKVYRNS*SFCLYYYHATLELI-RIDILIMHQLRSPNRKLL 172
           +FH   +V+ F + H VYRN  S    + H T+E+   +++  +H LR   R LL
Sbjct: 377 MFHRPERVVHF-DMHSVYRNELSEDKTHQHTTIEIYDSLNLYYLH-LRRFERHLL 429


>AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical
           protein Y67H2A.4a protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +3

Query: 279 DKLCADLERQE-LETPNGIASPSTYAQLLAIYLYQNDLCNAKFLWKRI 419
           D L  + ER++ L+ P+G+ +  ++AQLL ++   N+    K + KR+
Sbjct: 386 DILKMEFERRDALDNPDGLINEDSFAQLLLLHAQINEK-KQKHMLKRV 432


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,278,431
Number of Sequences: 27780
Number of extensions: 210377
Number of successful extensions: 523
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)