Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320A05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 148 2e-36
Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical pr... 136 1e-32
Z99710-3|CAB16864.1| 679|Caenorhabditis elegans Hypothetical pr... 126 7e-30
Z99710-1|CAB16867.1| 674|Caenorhabditis elegans Hypothetical pr... 125 2e-29
Z29117-1|CAA82376.1| 659|Caenorhabditis elegans Hypothetical pr... 116 8e-27
Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical pr... 115 2e-26
Z99710-7|CAJ58493.1| 645|Caenorhabditis elegans Hypothetical pr... 109 9e-25
Z99710-2|CAE54894.1| 562|Caenorhabditis elegans Hypothetical pr... 82 2e-16
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 39 0.002
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 35 0.031
U58752-7|AAB00669.1| 343|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z73897-1|CAA98062.1| 344|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL023847-4|CAA19550.1| 349|Caenorhabditis elegans Hypothetical ... 28 3.5
Z83106-1|CAB05493.1| 359|Caenorhabditis elegans Hypothetical pr... 28 4.7
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 28 4.7
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 27 6.2
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 27 8.1
L15313-5|AAA28199.1| 99|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical ... 27 8.1
AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical ... 27 8.1
AC006644-5|AAF39834.1| 786|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 148 bits (359), Expect = 2e-36
Identities = 76/169 (44%), Positives = 106/169 (62%)
Frame = +3
Query: 15 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERY 194
NPD+ ER+K SF+V +L + GGE+ RREVE V D KEL+D+ P ++S E
Sbjct: 10 NPDITEERKKASFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPTPFMSRDELI 69
Query: 195 ENSIRKACILYEFFRKYSETNNTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMNQ 374
+NS+RK + + ++ TN Y +Q+ +D F LH MF+P + +Q
Sbjct: 70 DNSVRKLAGMAKNYKMIDLTN------IEKTTYFLQLVHVRDSMAFSLHYLMFLPVLQSQ 123
Query: 375 SAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEF 521
++P+Q+AEW+P+AL+ IIGTYAQTE+GHGT L LETTATY KT EF
Sbjct: 124 ASPEQLAEWMPRALSGTIIGTYAQTEMGHGTNLSKLETTATYGQKTSEF 172
>Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical
protein F59F4.1 protein.
Length = 667
Score = 136 bits (328), Expect = 1e-32
Identities = 73/173 (42%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Frame = +3
Query: 15 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERY 194
N D+ ER+K +FD + + +I GG E RRE+ + V + + KD VP E++S +ER
Sbjct: 10 NVDITNERKKATFDTERMSAWIHGGTEVMKRRREILDFVKSVDDFKDPVPTEFMSREERI 69
Query: 195 ENSIRKACILYEFFRKYSETNNT--LDA--FSPTNKYRVQMGVFKDISPFMLHMGMFVPT 362
N+ RK + TNNT +D F Y + + +D+ LH MF+PT
Sbjct: 70 LNNARKVVAM---------TNNTDQIDGSDFFGEGMYYQALTMGRDLHAMSLHYVMFIPT 120
Query: 363 IMNQSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEF 521
+ Q+ DQ+ EWL K ++ ++GTYAQTELGHGT L LETTATYDP TEEF
Sbjct: 121 LQGQTDDDQLDEWLTKTISRAVVGTYAQTELGHGTNLSKLETTATYDPATEEF 173
>Z99710-3|CAB16864.1| 679|Caenorhabditis elegans Hypothetical
protein F08A8.2 protein.
Length = 679
Score = 126 bits (305), Expect = 7e-30
Identities = 65/169 (38%), Positives = 101/169 (59%)
Frame = +3
Query: 15 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERY 194
NP+L+ ER+ +FD ++ I G EE RRE+ + V I EL D+ P +L+ +E+
Sbjct: 11 NPELLEERRMATFDTDKMAAVIYGSEEFARRRREITDAVSKIPELADIKPYPFLTREEKV 70
Query: 195 ENSIRKACILYEFFRKYSETNNTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMNQ 374
RK IL ++ + + +N ++ + +R +G + PF LH +F+PT+ +Q
Sbjct: 71 TEGTRKISILTKYLNQLIDRDNEEESL---HLHREVIGY--EGHPFALHDALFIPTLQSQ 125
Query: 375 SAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEF 521
++ +Q +WL +A EIIG YAQTELGHG+ LR LETTA YD ++EF
Sbjct: 126 ASDEQQEKWLERARRREIIGCYAQTELGHGSNLRNLETTAVYDIASQEF 174
>Z99710-1|CAB16867.1| 674|Caenorhabditis elegans Hypothetical
protein F08A8.1a protein.
Length = 674
Score = 125 bits (301), Expect = 2e-29
Identities = 70/169 (41%), Positives = 99/169 (58%)
Frame = +3
Query: 15 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERY 194
NPDL ER +FD + I GGE RRE+ + +I EL D +P Y++ +E+
Sbjct: 13 NPDLTAERLTATFDTHAMAAQIYGGEMRARRRREITAKLAEIPELHDSMPLPYMTREEKI 72
Query: 195 ENSIRKACILYEFFRKYSETNNTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMNQ 374
S RK +L + + SE + DA + +G+ + +P LH MF+P + Q
Sbjct: 73 MESARKLTVLTQ---RMSEIIDPTDAGELYHLNNEVLGI--EGNPMALHGVMFIPALNAQ 127
Query: 375 SAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEF 521
++ +Q A+WL +AL EIIGTYAQTE+GHGT L+ LETTATYD T+EF
Sbjct: 128 ASDEQQAKWLIRALRREIIGTYAQTEMGHGTNLQNLETTATYDIGTQEF 176
>Z29117-1|CAA82376.1| 659|Caenorhabditis elegans Hypothetical
protein C48B4.1 protein.
Length = 659
Score = 116 bits (280), Expect = 8e-27
Identities = 73/169 (43%), Positives = 91/169 (53%)
Frame = +3
Query: 15 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERY 194
N DL ER K +FD L GGE+ RE+ + V L D +P + + ER
Sbjct: 12 NQDLTDERFKATFDTDALAAVFHGGEDALKRIRELRDEVTKRWHLFDALPGAHRTRAERM 71
Query: 195 ENSIRKACILYEFFRKYSETNNTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMNQ 374
E+ RK L E ++++ N LD R MG+ + P LH MFVPTI NQ
Sbjct: 72 EDVSRKLKNLMESVGEFADFTNNLDMLVII---RDVMGI--EGFPLALHNLMFVPTIQNQ 126
Query: 375 SAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEF 521
+ +Q WL AL +IIGTYAQTELGHGT L +ETTATYD TEEF
Sbjct: 127 ADDEQTEWWLMDALQGKIIGTYAQTELGHGTNLGAIETTATYDKLTEEF 175
>Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical
protein F08A8.4 protein.
Length = 662
Score = 116 bits (279), Expect = 1e-26
Identities = 65/169 (38%), Positives = 94/169 (55%)
Frame = +3
Query: 15 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERY 194
NPDL ER+K +FD ++ I G E+ RRE+ V I EL D P ++ E+
Sbjct: 12 NPDLTEEREKGTFDTDKMAAVIYGSEKLARRRREISEAVSKIPELADTQPFPFMDRLEKI 71
Query: 195 ENSIRKACILYEFFRKYSETNNTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMNQ 374
RK +L R + ++ + + Y+ G+ + P LH MF+P +++Q
Sbjct: 72 TEGSRKLEVLNNNIRDIIDYDDNGERL---HIYQEVTGM--EGHPLALHEVMFIPALVSQ 126
Query: 375 SAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEF 521
++ +Q +WL +A EIIG YAQTE+GHGT LR LETTATY P T+EF
Sbjct: 127 ASKEQQEKWLGRARRREIIGCYAQTEMGHGTNLRKLETTATYFPDTQEF 175
>Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical
protein F08A8.3 protein.
Length = 660
Score = 115 bits (277), Expect = 2e-26
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Frame = +3
Query: 15 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERY 194
N DL ER+ +FD ++ I G EE RR++ + I EL + P +++ +E+
Sbjct: 9 NSDLTEERKNATFDTDKMAAVIYGREEIASRRRQLTESISRIHELAESKPLVFMTREEKI 68
Query: 195 ENSIRKACILYEFFRKYS-ETNNTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMN 371
S RK +L + + +N DA + YR +G+ + P LH MF+PT++
Sbjct: 69 AESCRKLEVLSRHWNQTPFNRDNEEDAL---HIYREVLGM--EGHPLALHDTMFIPTLVA 123
Query: 372 QSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEF 521
Q++ +Q +WL +A EIIG YAQTE+GHGT LR LETTATY P T+EF
Sbjct: 124 QASQEQQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPDTQEF 173
>Z99710-7|CAJ58493.1| 645|Caenorhabditis elegans Hypothetical
protein F08A8.1c protein.
Length = 645
Score = 109 bits (263), Expect = 9e-25
Identities = 62/148 (41%), Positives = 89/148 (60%)
Frame = +3
Query: 78 IDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKERYENSIRKACILYEFFRKYSETN 257
I GGE RRE+ + +I EL D +P Y++ +E+ S RK +L + + SE
Sbjct: 5 IYGGEMRARRRREITAKLAEIPELHDSMPLPYMTREEKIMESARKLTVLTQ---RMSEII 61
Query: 258 NTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMNQSAPDQVAEWLPKALNLEIIGT 437
+ DA + +G+ + +P LH MF+P + Q++ +Q A+WL +AL EIIGT
Sbjct: 62 DPTDAGELYHLNNEVLGI--EGNPMALHGVMFIPALNAQASDEQQAKWLIRALRREIIGT 119
Query: 438 YAQTELGHGTFLRGLETTATYDPKTEEF 521
YAQTE+GHGT L+ LETTATYD T+EF
Sbjct: 120 YAQTEMGHGTNLQNLETTATYDIGTQEF 147
>Z99710-2|CAE54894.1| 562|Caenorhabditis elegans Hypothetical
protein F08A8.1b protein.
Length = 562
Score = 82.2 bits (194), Expect = 2e-16
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +3
Query: 336 LHMGMFVPTIMNQSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTE 515
LH MF+P + Q++ +Q A+WL +AL EIIGTYAQTE+GHGT L+ LETTATYD T+
Sbjct: 3 LHGVMFIPALNAQASDEQQAKWLIRALRREIIGTYAQTEMGHGTNLQNLETTATYDIGTQ 62
Query: 516 EF 521
EF
Sbjct: 63 EF 64
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 42.3 bits (95), Expect = 2e-04
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Frame = +3
Query: 18 PDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEY--LSHKER 191
P + + R+ +FD ++L ++G EEH + EV V +K + V +Y LS +E+
Sbjct: 4 PLIDKYRKMATFDWKKLKAAVEG-EEHVRLKSEV---VAKMKS-EPVFHRDYRVLSREEQ 58
Query: 192 YENSIRKACILYEFFRKYSETNNTLDAFSPTNKYRVQMGVFKDISP-----FMLHMGMFV 356
E ++++ ++K E D +S + + LH +F
Sbjct: 59 RE-------VVHQRWKKIVEWGLFKDPYSDLENFHALTETLEAYDQGTSARLFLHGNVFG 111
Query: 357 PTIMNQSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYD 503
+ + D+ + + K N EI+G + TE+GHG+ ++TTAT+D
Sbjct: 112 AAVKSMGT-DRHKDLIQKTENNEIVGAFCLTEVGHGSNTAEIQTTATFD 159
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 324 SPFMLHMGMFVPTIMNQSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYD 503
S + + + I N + DQ +++P + + IG + TE HG+ G+ET AT+D
Sbjct: 111 STMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIGCFGLTEPNHGSNPGGMETKATWD 170
Query: 504 PKTEEF 521
T+ +
Sbjct: 171 ETTKTY 176
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 35.1 bits (77), Expect = 0.031
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 336 LHMGMFVPTIMNQSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYD 503
+H +F+P I+ Q ++LPK +G++A +E G G+ L+TTA D
Sbjct: 59 VHNTLFIPLIIELGTEKQKEKYLPKCYT-SSVGSFALSETGSGSDAFALKTTAKKD 113
>U58752-7|AAB00669.1| 343|Caenorhabditis elegans Hypothetical
protein B0218.7 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +3
Query: 60 QELVHFIDG-GEEHTLERREVENL--VLDIKELKD 155
Q H +D GE+H +E + ENL ++DIK LKD
Sbjct: 155 QYFEHIMDSEGEQHKMENKNEENLLTIMDIKNLKD 189
>Z73897-1|CAA98062.1| 344|Caenorhabditis elegans Hypothetical
protein ZK617.2 protein.
Length = 344
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 396 EWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYD 503
+W+ K L E + + + EL G+F G+ TT T+D
Sbjct: 28 QWMQKNLKPEEVKAFVRDELTTGSFGGGVVTTETHD 63
>AL023847-4|CAA19550.1| 349|Caenorhabditis elegans Hypothetical
protein Y57A10C.8 protein.
Length = 349
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 147 LKDVVPEEYLSHKERYENSIRKACILYEFFRKYSETNNTLDAF 275
L D + + + S +R N AC + + F KY +NTL +F
Sbjct: 165 LFDFLFQIFSSEYQRVPNCATMACFVNKIFLKYLSYSNTLSSF 207
>Z83106-1|CAB05493.1| 359|Caenorhabditis elegans Hypothetical
protein F22B8.1 protein.
Length = 359
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 171 YLSHKERYENSIRKACILYEFFRKYSETNNTLDAFSP 281
Y++H ER + + IL FF Y+ N+T+D F P
Sbjct: 60 YIAHDER-KTHLGNYRILLIFFSIYNILNSTIDVFMP 95
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 185 LVAQILLRDNIF*LFDVKYQIF 120
LVA+++ R N+F FD+ YQ F
Sbjct: 200 LVAEVIKRKNLFTFFDIAYQGF 221
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 318 DISPFMLHMGMFVPTIMNQSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTAT 497
D+ P +LH G PT ++ D++++ + L++ G Q E F+ E +
Sbjct: 150 DLIPELLHFGTITPTQISAINTDKLSKIVEGINGLKLDGKVGQVEKQLIEFVSKQEELSN 209
Query: 498 YDP 506
DP
Sbjct: 210 IDP 212
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +3
Query: 318 DISPFMLHMGMFVPTIMNQSAPDQVAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTAT 497
D+ P +LH G PT ++ D++++ + +L++ + E TF+ E +
Sbjct: 120 DLIPELLHFGTLTPTQISAINTDKLSKIVEGINDLKLDKNVGEVEKQLRTFVSDQEKLSK 179
Query: 498 YDP 506
DP
Sbjct: 180 IDP 182
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 386 VRSALVHDGRYEHSHVQHKWGNVFKHSHLYAIFVCWT 276
++S V DG+ E+ + WG V K+ ++A++ +T
Sbjct: 233 IQSMKVIDGKPEYKNAFDVWGKVIKNEGIFALWKGFT 269
>L15313-5|AAA28199.1| 99|Caenorhabditis elegans Hypothetical
protein ZK353.2 protein.
Length = 99
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 289 NIAYRWECLKTFPHLCC 339
N+ YRW C P+ CC
Sbjct: 46 NVFYRWRCCDYSPYECC 62
>AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical
protein H17B01.4a protein.
Length = 946
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 284 KQISRTDGSV*RHFPIYVAHGNVRTDHHEPERSGPGRRVAAEGPQSGDYWNL 439
+QI+R+ V +GN D RS G AA GP DY+NL
Sbjct: 432 RQITRSIEKVIYVVTSITKNGNGVADFINSVRSASGSGSAASGPFERDYFNL 483
>AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical
protein ZC250.2 protein.
Length = 379
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 380 SALVHDGRYEHSHVQHKWGNVFKHSH 303
S D +YE + HKW N+ H H
Sbjct: 99 SGFAIDAKYEFAQFLHKWENLRLHHH 124
>AC006644-5|AAF39834.1| 786|Caenorhabditis elegans Hypothetical
protein F55A3.2 protein.
Length = 786
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 69 VHFIDGGEEHTLERREVENLVLDIKELKDVVPEEYLSHKER 191
+ F+DGG R++ ++V+ K +VP E + K++
Sbjct: 645 IQFLDGGLAGHPTYRKISSVVISKKRKNHIVPHEKIRKKQK 685
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,701,309
Number of Sequences: 27780
Number of extensions: 287799
Number of successful extensions: 852
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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