Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320A05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    25   0.47 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.47 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.9  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   4.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.4  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    21   5.8  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +3

Query: 165 EEYLSHKER---YENSIRKACILYEFFRKYSETN 257
           E +L  +ER   YE   RK  + YE + KYS T+
Sbjct: 41  EAWLVQQEREQEYEKLKRKMILEYELYIKYSHTH 74


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 222 VCTPSVSNSRNAPCGSDTP 166
           VC+P +S   +  CGS+TP
Sbjct: 35  VCSPDLSVFTSPACGSETP 53


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 81  DGGEEHTLERREVENLV 131
           DGG+   +E RE+ NLV
Sbjct: 32  DGGDYEVVESRELTNLV 48


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 81  DGGEEHTLERREVENLVLDIKELKDVVPE 167
           DGG  + +  RE+  + LD  E+  ++ E
Sbjct: 75  DGGNFNEVVVREIAEIYLDENEVNKLITE 103


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 414  GPSAATRRPGPER 376
            GPSA+  RP PER
Sbjct: 1356 GPSASGGRPVPER 1368


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 45  CSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVV 161
           C+ D  +L+    G ++ T+ER      +  I ++ D++
Sbjct: 85  CTLDGNKLIQVQKGEKQTTIEREFSSTEMKAIMKVDDII 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,636
Number of Sequences: 438
Number of extensions: 3625
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)