Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320A03f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23H4.06 |gln1||glutamate-ammonia ligase Gln1|Schizosaccharom... 48 8e-07
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 28 0.97
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 27 1.7
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 27 1.7
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 27 2.2
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 26 3.9
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 5.2
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 25 5.2
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 25 6.8
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 9.0
>SPAC23H4.06 |gln1||glutamate-ammonia ligase
Gln1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 359
Score = 48.0 bits (109), Expect = 8e-07
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 LSKT-LLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNY 320
LSK +L++Y DLP KV+A Y+WIDG H+R K TL+ P + L +WN+
Sbjct: 10 LSKAAILNKYADLP-QNGKVMAEYIWIDGF-NHLRSKTMTLDAKPSSIDQLRVWNF 63
Score = 40.7 bits (91), Expect = 1e-04
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 385 IYRDPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHE 519
+Y DPFRRG+++LV+ Y P NHR C + ++ D E
Sbjct: 85 MYNDPFRRGDNILVLAACYTADGSPNGFNHRDACAKLLEKHADKE 129
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 27.9 bits (59), Expect = 0.97
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 141 SSLAPDPIKFLDCLALCFEFPTFF*HRLITFYCL 40
S + P ++++ +L ++P FF H +T +CL
Sbjct: 258 SGILPYFLQWMAVFSLYAKYPAFFEHHFLTIFCL 291
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 72 KMSETQNKVQDNPKILSGPVL-KNSPNAFLSKTLLDRYRDLPLPEDK 209
K E ++++++ K + G + +NS LS LLD+Y +P+D+
Sbjct: 259 KAKEYEDRIRNAGKFVFGENMDRNSSGLLLSDELLDQYSISNIPKDE 305
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 114 ILSGPVLKNSPNAFLSKTLLD 176
++ P +KN PN F+SK L+D
Sbjct: 447 VILDPHIKNDPNYFVSKELID 467
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 142 EFFSTGPDKIFGLSCTLF*VSDIFLAPLNHLLLFIIG 32
++FS G +FG CTL + + P LL +IIG
Sbjct: 170 DYFSAGAFVLFGSYCTLILMLRLDQLPGGKLLCWIIG 206
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 25.8 bits (54), Expect = 3.9
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 69 RKMSETQNKVQDNPKILSGPVLKNSPNAF--LSKTLLDRYRDLPLPEDKVLATYVWI 233
RK+S + K+ D + +LKNS + L K+L++ R L ED++ T +WI
Sbjct: 439 RKISSREIKMLD-----ARSMLKNSFDGSRDLQKSLIEHVRTLRRIEDEITLTKMWI 490
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 57 LSGARKMSETQNKVQDNPKILSGPVLKNSPNAFLS 161
+SG+ + E+ ++ K LS P +KN+ N LS
Sbjct: 159 ISGSITIPESDQQINLQNKFLSTPSIKNNANKSLS 193
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 45 NKR*LSGARKMSETQNKVQDNPKILSGPVLKNSPNAFLSKTLLDRYRDLPLPEDKVL 215
NKR +K+ ET+N+ D + L+ P K + + T L RD + DK +
Sbjct: 1120 NKRQKGDVKKIDETKNEATDMEESLTTPSGKVNKEVIVDDTSL---RDEAIVPDKAI 1173
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 366 HLEAPGHIQGPVPARKPRACHVRH 437
H P H+ GP+ +P+A V H
Sbjct: 147 HPLRPSHVSGPLSPPEPKAASVDH 170
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 317 IPYRQVFRSLWNVVQSPVFATNML 246
+PY Q +R WN +P+++ +L
Sbjct: 2160 VPYGQAWRFFWNTSNTPLWSIIIL 2183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,120,798
Number of Sequences: 5004
Number of extensions: 42400
Number of successful extensions: 125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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