Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319H12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000573-1|AAH00573.1|  139|Homo sapiens cornichon homolog 4 (Dr...    81   2e-15
AK222634-1|BAD96354.1|  139|Homo sapiens HSPC163 protein variant...    79   1e-14
BC103741-1|AAI03742.1|  144|Homo sapiens cornichon homolog (Dros...    44   3e-04
AY358635-1|AAQ88998.1|  144|Homo sapiens CNIL protein.                 44   3e-04
AF104398-1|AAC98388.1|  144|Homo sapiens cornichon protein.            44   3e-04
AF031379-1|AAD32301.1|  134|Homo sapiens cornichon-like protein ...    43   6e-04

>BC000573-1|AAH00573.1|  139|Homo sapiens cornichon homolog 4
           (Drosophila) protein.
          Length = 139

 Score = 81.4 bits (192), Expect = 2e-15
 Identities = 32/56 (57%), Positives = 44/56 (78%)
 Frame = +2

Query: 353 ETVLFSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTL 520
           E V+F   L+D  A++FL +Y+IITLSDLECDY+NA+ CC KLN W++P+ I HT+
Sbjct: 2   EAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTI 57


>AK222634-1|BAD96354.1|  139|Homo sapiens HSPC163 protein variant
           protein.
          Length = 139

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 31/56 (55%), Positives = 43/56 (76%)
 Frame = +2

Query: 353 ETVLFSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTL 520
           E V+F   L+   A++FL +Y+IITLSDLECDY+NA+ CC KLN W++P+ I HT+
Sbjct: 2   EAVVFVFSLLGCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTI 57


>BC103741-1|AAI03742.1|  144|Homo sapiens cornichon homolog
           (Drosophila) protein.
          Length = 144

 Score = 44.0 bits (99), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 32/50 (64%)
 Frame = +2

Query: 365 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAH 514
           + L L+ T A++F  I++II   +L+ DY N  + C+ LN  ++P+Y+ H
Sbjct: 10  YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIH 59


>AY358635-1|AAQ88998.1|  144|Homo sapiens CNIL protein.
          Length = 144

 Score = 44.0 bits (99), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 32/50 (64%)
 Frame = +2

Query: 365 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAH 514
           + L L+ T A++F  I++II   +L+ DY N  + C+ LN  ++P+Y+ H
Sbjct: 10  YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIH 59


>AF104398-1|AAC98388.1|  144|Homo sapiens cornichon protein.
          Length = 144

 Score = 44.0 bits (99), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 32/50 (64%)
 Frame = +2

Query: 365 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAH 514
           + L L+ T A++F  I++II   +L+ DY N  + C+ LN  ++P+Y+ H
Sbjct: 10  YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIH 59


>AF031379-1|AAD32301.1|  134|Homo sapiens cornichon-like protein
           protein.
          Length = 134

 Score = 43.2 bits (97), Expect = 6e-04
 Identities = 18/48 (37%), Positives = 31/48 (64%)
 Frame = +2

Query: 371 LCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAH 514
           L L+ T A++F  I++II   +L+ DY N  + C+ LN  ++P+Y+ H
Sbjct: 2   LALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIH 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,078,696
Number of Sequences: 237096
Number of extensions: 1227025
Number of successful extensions: 1929
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1929
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)