Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319H12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.27 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    24   1.1  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.5  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   5.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   5.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   5.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 51  GI*YRTYYLHCCSLQVKANNWNWNMFVQLNP 143
           GI +R+Y + C       NNW W  F++  P
Sbjct: 53  GINWRSYVV-CDVAYNNVNNWLWTPFIERGP 82


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 108 YLPSLVDYNNVGSRYGI 58
           +LP +V YNN    YG+
Sbjct: 103 WLPDIVLYNNADGEYGV 119


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 99  KANNWNWNMFVQLN 140
           + +NWNWN  ++ N
Sbjct: 22  EGSNWNWNTLLRPN 35


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 99  KANNWNWNMFVQLN 140
           + +NWNWN  ++ N
Sbjct: 66  EGSNWNWNTLLRPN 79


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 99  KANNWNWNMFVQLN 140
           + +NWNWN  ++ N
Sbjct: 66  EGSNWNWNTLLRPN 79


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 99  KANNWNWNMFVQLN 140
           + +NWNWN  ++ N
Sbjct: 66  EGSNWNWNTLLRPN 79


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +2

Query: 290 LYGVLLNRY*TNSYFCVMILAETVLFSLCLIDTGAVLFLLIYYIIT 427
           +Y VL NR+   + +C +  +  VLFS   I    V+ L  Y+ IT
Sbjct: 104 IYEVLENRWLFTTDWCDVWRSLDVLFSTASILNLCVISLDRYWAIT 149


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 150 RLMDSIAQTYSNSNYLPSLVDYNNVGSR 67
           +++ S++  Y+ SNY     +YNN   +
Sbjct: 80  KIISSLSNNYNYSNYNNYNNNYNNYNKK 107


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 392 AVLFLLIYYIIT 427
           AVLFL +YY +T
Sbjct: 12  AVLFLALYYYLT 23


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 120 SNSNYLPSLVDYNNVGSRYGI 58
           S + +LP +V YNN    Y +
Sbjct: 112 SENIWLPDIVLYNNADGNYEV 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,748
Number of Sequences: 438
Number of extensions: 3167
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)