Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319H06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1574 - 27837041-27837490 31 0.42
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 31 0.56
05_04_0057 + 17543016-17543312 31 0.56
10_04_0020 + 7644329-7644666,7644960-7645146,7645311-7645365,764... 30 0.98
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 30 0.98
10_08_0645 - 19562886-19564484 29 1.7
01_06_0572 - 30337572-30338107,30338209-30338422,30338505-303388... 29 1.7
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 4.0
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 28 4.0
02_02_0338 + 9105725-9106581,9106950-9107091 28 4.0
10_08_0383 - 17424194-17425567 25 4.7
12_01_1054 + 10847342-10847543,10847627-10847962,10848557-108488... 28 5.2
12_01_0511 + 4049760-4049967,4050096-4050166,4051306-4051364,405... 28 5.2
11_01_0359 - 2731522-2732346 28 5.2
06_02_0155 + 12380452-12381012 28 5.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 28 5.2
03_05_0795 + 27783813-27785246,27785339-27785591,27786377-27786639 28 5.2
03_05_0564 - 25655095-25655106,25656089-25656541,25656886-256569... 28 5.2
02_02_0144 - 7153464-7153822,7153933-7154837,7155962-7156224 28 5.2
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 27 6.9
05_06_0084 - 25435650-25436600 27 6.9
03_03_0265 - 16000085-16000319,16001730-16001854,16004323-16005492 27 6.9
01_06_1213 - 35466954-35467592 27 6.9
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 27 9.1
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 27 9.1
07_03_1280 + 25434933-25436153 27 9.1
07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609 27 9.1
07_01_0288 - 2097361-2097855 27 9.1
>07_03_1574 - 27837041-27837490
Length = 149
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 340 VEPDSLKYAPEPPPYVQCETTPSLAMDSIRYMYL 239
V+ D L Y P+PP + + TTP+L D +R + L
Sbjct: 80 VDTDDLFYTPDPPVHHKPTTTPTLDADVLRALSL 113
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 427 PGPRVWE-ALPRVSVSAPHQKPGPH-YLEY--GVEPDSLKYAPEPPPYV 293
P P +E + P S P P P Y Y G+ P +Y+PEPP YV
Sbjct: 645 PSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 693
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -2
Query: 427 PGPRVWEALPRVSV-SAPHQKPGPH-YLEY--GVEPDSLKYAPEPPP 299
P P + P V S P P P Y Y G+ P +YAPEPPP
Sbjct: 694 PSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPP 740
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = -2
Query: 409 EALPRVSVSAPHQKPG--PHYLEYGVEPDSL-----KYAPEPPPYV 293
E P V AP+ PG P EY EP S +YAP+PP YV
Sbjct: 663 EYAPEPPVYAPYP-PGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYV 707
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = -2
Query: 421 PRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSL-----KYAPEPPPY 296
P ++ + P S P P P +Y +P S +YAPEPP Y
Sbjct: 676 PGIFPSPPEYSPEPPSYVPSPP--QYAPQPPSYVPSPPEYAPEPPVY 720
>05_04_0057 + 17543016-17543312
Length = 98
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 468 GPPSR-SARRWWLNVRGRACGRRSPGSVSRRL 376
GPP R RRWWL RA R P V RL
Sbjct: 52 GPPGRRGGRRWWLLCPSRAGRRGKPAMVHLRL 83
>10_04_0020 +
7644329-7644666,7644960-7645146,7645311-7645365,
7645390-7645438,7645984-7646200
Length = 281
Score = 30.3 bits (65), Expect = 0.98
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 229 TLLRGTCTVWSPWL 270
TL+ GTCT+W PW+
Sbjct: 237 TLMCGTCTIWRPWV 250
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 400 PRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPPYVQC 287
P+ PHQ P P Y Y + Y P P PY C
Sbjct: 75 PQGPYPPPHQPPPPGYQGYFNQGQQPYYPPPPLPYDHC 112
>10_08_0645 - 19562886-19564484
Length = 532
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +3
Query: 189 PPQRAHPRQRAGLNPPPRYMYRM-----ESMAREGVVSHCT*GGGSGAYFNESGSTPYSK 353
PPQ+ PR + PPPR R E+ A + ++ + GGG G + ++ + K
Sbjct: 437 PPQQ-QPRASSASRPPPRLTARWSGHLDEASAADASAANQSPGGGGGGFGKDAPMREFKK 495
Query: 354 *WG 362
+G
Sbjct: 496 LYG 498
>01_06_0572 -
30337572-30338107,30338209-30338422,30338505-30338862,
30338948-30339048,30339185-30339749,30340553-30340664,
30341196-30341372,30341589-30341686,30341859-30341953,
30342078-30342158
Length = 778
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 446 VAGGSMSGAARVGGAPPGQCLGASPETRTPLFGV 345
VAG ++ G A +GG PG G +P R ++ V
Sbjct: 230 VAGRTVPGVAALGGFAPGTASGGAPLARVAVYKV 263
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -2
Query: 478 LGTGPPLEECASLVAQCPGPRVWEALPRVSVSAPHQKPG-PHYLEYGVEPDSLKYAPEPP 302
LG PP + Q P P ++ Q PG PH + G YAP+P
Sbjct: 81 LGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMAQQMQPPGVPHVMPPGAVRPPAMYAPQPG 140
Query: 301 PYVQ 290
Y+Q
Sbjct: 141 VYLQ 144
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 346 YGVEPDSLKYAPEPPPYVQCETTPSLAMDSIRYMY 242
Y P S Y+P P Y T+PS + S Y Y
Sbjct: 1704 YSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNY 1738
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -2
Query: 400 PRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPPYVQCETTPSLAMDSIRY 248
P S S P Y P S Y+P P Y T+PS + S Y
Sbjct: 1702 PSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSY 1752
>02_02_0338 + 9105725-9106581,9106950-9107091
Length = 332
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 189 PPQRAHPRQRAGLNPPPRYMYRME 260
PP A P Q L PPP + YR +
Sbjct: 38 PPPLAPPTQARPLKPPPAHQYRQQ 61
>10_08_0383 - 17424194-17425567
Length = 457
Score = 25.4 bits (53), Expect(2) = 4.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 385 SAPHQKPGPHYLEYGVEPDSLKYAPEPPPYVQCETTPSLAM 263
SAP ++ Y E+ P S +P+P P PS A+
Sbjct: 131 SAPSRRRNASYYEFLFTPSSSSSSPKPYPLSLPHRLPSTAI 171
Score = 21.0 bits (42), Expect(2) = 4.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 421 PRVWEALPRVSVSAPHQKPGP 359
P + L R+S APH P P
Sbjct: 74 PALRSLLSRLSPPAPHAPPHP 94
>12_01_1054 +
10847342-10847543,10847627-10847962,10848557-10848807,
10849226-10849313,10849548-10849723,10850597-10850656,
10850811-10850901,10851563-10851639,10852565-10852653,
10852950-10853061,10853623-10853725,10854892-10855121
Length = 604
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 458 RGVRVAGGSMSGAARVGGAPPGQCLGASPETRTPLFGVRS 339
RG+ V G + GA VG A G L + R L+G R+
Sbjct: 71 RGLLVRGFDIVGAVHVGSADAGGALELARAVRERLYGERA 110
>12_01_0511 +
4049760-4049967,4050096-4050166,4051306-4051364,
4052424-4052549,4052943-4053037,4053263-4053312
Length = 202
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 459 SRSARRWWLNVRGRACGRRSPGSVSRRLTRN-PDPTIWS 346
S RRW + RGR C S + RR +R+ P IWS
Sbjct: 7 SSRRRRWVGSARGR-CAEESASAAGRRRSRSRPVGVIWS 44
>11_01_0359 - 2731522-2732346
Length = 274
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 5/62 (8%)
Frame = -2
Query: 466 PPLEECASLVAQCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEP-----DSLKYAPEPP 302
PP A + P P +V+ P+ P PH + P Y P PP
Sbjct: 11 PPSSNAAYFASAAPPPAATNGTAAFAVAYPYPAPPPHSHSHPPPPPPHAYHHHHYPPPPP 70
Query: 301 PY 296
P+
Sbjct: 71 PH 72
>06_02_0155 + 12380452-12381012
Length = 186
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 443 AGGSMSGAARVGGAPPGQCLGASPETRTPLFGVRSRA*FIEICAGAAPL 297
AGG+++G G APP E R P +G + + E AG P+
Sbjct: 44 AGGAVNGNG--GAAPPAPATSPDTEVRAPTYGDKQISPPKEGAAGKPPM 90
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = -2
Query: 502 NTTHYRAXLGTGPPLEECASLVAQCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSL 323
N TH+R+ T L++ S + P P + + P P P + + P
Sbjct: 34 NNTHHRSSSPTQTTLQQLHSPDSPPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPP 93
Query: 322 KYAPEPPP 299
P PPP
Sbjct: 94 PLLPTPPP 101
>03_05_0795 + 27783813-27785246,27785339-27785591,27786377-27786639
Length = 649
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -2
Query: 406 ALPRVSVSAPHQKPGPHYLEYGVE-PDSLKYAPEPPPYVQCETTPSLAMDSIRYMYL 239
A+ +S HQ+ P L P SL+ + PP+V+ ++ S+ +D I +YL
Sbjct: 190 AVKNISRLVKHQQQEPVDLVGATFLPRSLEIKEKQPPFVRMKSLKSILLDKIYGLYL 246
>03_05_0564 -
25655095-25655106,25656089-25656541,25656886-25656962,
25657058-25657149,25657447-25657553,25657662-25657747,
25657861-25657977,25658205-25658288,25658400-25658479,
25658958-25659132,25659455-25659521,25660175-25660236,
25660369-25660450,25660890-25661312,25661514-25661610,
25662055-25662095,25662673-25662837
Length = 739
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 4 FFKRYFILLFITFTCKFINCLNSFQYL*TAST 99
FF R+F+L F+ F F + F YL ++T
Sbjct: 538 FFPRFFLLYFLVFHIYFFSYTYGFSYLAFSAT 569
>02_02_0144 - 7153464-7153822,7153933-7154837,7155962-7156224
Length = 508
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 470 RAPPRGVRVAGGSMSGAARVGG----APPGQCLGASPETRTPLFGVRSRA 333
R P +R + G + R G APPG+ LG S E R PL+ R A
Sbjct: 24 RPPGDWIRRSYGEKARRRRGNGEEESAPPGRELGGSKEERAPLWTKRGGA 73
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 461 PRGVRVAGGSMSGAARVGG 405
PRG R GG MSG +R GG
Sbjct: 299 PRGRRGRGGRMSGVSRKGG 317
>05_06_0084 - 25435650-25436600
Length = 316
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 386 DTDPGERLPHARPRTLSHQRRALLEGGPGTQXRPIVSRI 502
DTD G +L R R +H+RR GG G + + R+
Sbjct: 177 DTDAGAKLRTRRHRRRAHRRRRSSLGGSGRRSFSVSGRM 215
>03_03_0265 - 16000085-16000319,16001730-16001854,16004323-16005492
Length = 509
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 473 YRAPPRGVRVAGGSMSGAARVGGAPPGQCLGA 378
YRAP G + ++GA+R +PPG GA
Sbjct: 123 YRAPGTGELLVANPLTGASRALPSPPGAHGGA 154
>01_06_1213 - 35466954-35467592
Length = 212
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 467 APPRGVRVAGGSMSGAARVGGAPPGQCLGASPET 366
A P GV +G S + AA GG G GA+ T
Sbjct: 165 AQPAGVEPSGSSSAAAAAAGGGDAGSGGGAAATT 198
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 27.1 bits (57), Expect = 9.1
Identities = 27/74 (36%), Positives = 33/74 (44%)
Frame = -1
Query: 461 PRGVRVAGGSMSGAARVGGAPPGQCLGASPETRTPLFGVRSRA*FIEICAGAAPLRAM*N 282
P G GG+ +GAA G A ASP P + A I +APLR+
Sbjct: 86 PAGGAGDGGTDAGAAATGDASSSSSSSASPHPTAPA-NISYMAMPI---YHSAPLRSF-- 139
Query: 281 YTLSSHGLHTVHVP 240
LSSH L TV +P
Sbjct: 140 --LSSHRLLTVLLP 151
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = -2
Query: 472 TGPPLEECASLVAQCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
TG +E A + + GP+ P +PH+ P H P AP PPP
Sbjct: 199 TGADVEAAAGIKPKLKGPKGAPPPPPPPPPSPHRHPAAH-----PPPPPHHPAPRPPP 251
>07_03_1280 + 25434933-25436153
Length = 406
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 473 YRAPPRGVRVAGGSMSGAARVGGAPP 396
YRAP G ++GA+RV APP
Sbjct: 121 YRAPDTGELTVANPLTGASRVLPAPP 146
>07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609
Length = 475
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 483 RXWVPGPPSRSARRWWLNVRGRACG 409
R +PG R R WW + + + CG
Sbjct: 299 RPVLPGQHEREGRWWWEDAKAKECG 323
>07_01_0288 - 2097361-2097855
Length = 164
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 383 RDTDPGERLPHARPRTLSHQRRALLEGGP--GTQXRPIVSRITIHW 514
RD D +RLP R H+RR G P G + ++ R ++ W
Sbjct: 26 RDRDSPQRLPPPLLRDRQHRRRVPAAGVPVAGVRGDHVLRRRSLRW 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,536,519
Number of Sequences: 37544
Number of extensions: 349635
Number of successful extensions: 1526
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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