Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319H06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with... 32 1.1
AF105216-1|AAD14681.1| 695|Homo sapiens voltage-gated potassium... 31 1.9
AF105202-1|AAD14680.1| 695|Homo sapiens voltage-gated potassium... 31 1.9
AL691432-5|CAM12834.1| 386|Homo sapiens matrix metallopeptidase... 30 4.3
AB010962-1|BAA24834.1| 386|Homo sapiens MIFR-2 protein. 30 4.3
BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein. 29 9.9
BC080191-1|AAH80191.1| 1017|Homo sapiens MAN2C1 protein protein. 29 9.9
BC050550-1|AAH50550.1| 1040|Homo sapiens mannosidase, alpha, cla... 29 9.9
BC017206-1|AAH17206.1| 422|Homo sapiens ZNF446 protein protein. 29 9.9
AY280800-1|AAQ16304.1| 450|Homo sapiens zinc finger protein 446... 29 9.9
AY279351-1|AAQ62848.1| 422|Homo sapiens truncated zinc finger p... 29 9.9
AK026153-1|BAB15377.1| 347|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK000633-1|BAA91298.1| 450|Homo sapiens protein ( Homo sapiens ... 29 9.9
AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain... 29 9.9
AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain... 29 9.9
AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain... 29 9.9
AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain... 29 9.9
AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain... 29 9.9
AF044414-1|AAC00190.2| 1062|Homo sapiens alpha mannosidase 6A8B ... 29 9.9
>AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with
C-type lectin type II protein.
Length = 622
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 427 PGPRVWEALPRV-SVSAPHQKPGPHYLEYGVEPDSLKYAPEPPPYVQCETTPSL 269
PGPR LP V + P PGP V P +L+ P P P ++ PSL
Sbjct: 559 PGPRGLPGLPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTPAPEDNSKSKPSL 612
>AF105216-1|AAD14681.1| 695|Homo sapiens voltage-gated potassium
channel KCNQ4 protein.
Length = 695
Score = 31.5 bits (68), Expect = 1.9
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PRQRAGLNPPPRYMYRMESMAREGVVSHC--T*GGGSGAYFNESGS--TPYSK*WGPGFW 374
P +R GL PPP R E +A V S GGGS GS P + GPG
Sbjct: 5 PPRRLGLGPPPGDAPRAELVALTAVQSEQGEAGGGGSPRRLGLLGSPLPPGAPLPGPGSG 64
Query: 375 *GAETLTRGSASHTR 419
G+ R SA+H R
Sbjct: 65 SGSACGQRSSAAHKR 79
>AF105202-1|AAD14680.1| 695|Homo sapiens voltage-gated potassium
channel KCNQ4 protein.
Length = 695
Score = 31.5 bits (68), Expect = 1.9
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PRQRAGLNPPPRYMYRMESMAREGVVSHC--T*GGGSGAYFNESGS--TPYSK*WGPGFW 374
P +R GL PPP R E +A V S GGGS GS P + GPG
Sbjct: 5 PPRRLGLGPPPGDAPRAELVALTAVQSEQGEAGGGGSPRRLGLLGSPLPPGAPLPGPGSG 64
Query: 375 *GAETLTRGSASHTR 419
G+ R SA+H R
Sbjct: 65 SGSACGQRSSAAHKR 79
>AL691432-5|CAM12834.1| 386|Homo sapiens matrix metallopeptidase
23B protein.
Length = 386
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 422 AARVGGAPPGQCLGASPETRTPLFGVRSR 336
AAR+ G PG+ +GA+P R P VR R
Sbjct: 257 AARLEGVVPGRAVGAAPALRMPRQAVRVR 285
>AB010962-1|BAA24834.1| 386|Homo sapiens MIFR-2 protein.
Length = 386
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 422 AARVGGAPPGQCLGASPETRTPLFGVRSR 336
AAR+ G PG+ +GA+P R P VR R
Sbjct: 257 AARLEGVVPGRAVGAAPALRMPRQAVRVR 285
>BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein.
Length = 1062
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 470 RAPPRGVRVAGGSMSGAARVGGAPPGQCLGASP 372
R PP G G + G APPG ASP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASP 57
>BC080191-1|AAH80191.1| 1017|Homo sapiens MAN2C1 protein protein.
Length = 1017
Score = 29.1 bits (62), Expect = 9.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -2
Query: 448 ASLVAQCPGPR---VWEALP--RVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
A+L A PGP + LP R+ V A + G H L P S+ YAP PPP
Sbjct: 612 AALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVP-SMGYAPVPPP 665
>BC050550-1|AAH50550.1| 1040|Homo sapiens mannosidase, alpha, class
2C, member 1 protein.
Length = 1040
Score = 29.1 bits (62), Expect = 9.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -2
Query: 448 ASLVAQCPGPR---VWEALP--RVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
A+L A PGP + LP R+ V A + G H L P S+ YAP PPP
Sbjct: 612 AALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVP-SMGYAPVPPP 665
>BC017206-1|AAH17206.1| 422|Homo sapiens ZNF446 protein protein.
Length = 422
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 433 QCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
Q PGP WE L + AP +PG + P + P P
Sbjct: 284 QGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETRLEPAATP 328
>AY280800-1|AAQ16304.1| 450|Homo sapiens zinc finger protein 446
protein.
Length = 450
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 433 QCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
Q PGP WE L + AP +PG + P + P P
Sbjct: 284 QGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETRLEPAATP 328
>AY279351-1|AAQ62848.1| 422|Homo sapiens truncated zinc finger
protein isoform protein.
Length = 422
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 433 QCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
Q PGP WE L + AP +PG + P + P P
Sbjct: 256 QGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETRLEPAATP 300
>AK026153-1|BAB15377.1| 347|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22500 fis, clone HRC11301. ).
Length = 347
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 433 QCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
Q PGP WE L + AP +PG + P + P P
Sbjct: 181 QGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETRLEPAATP 225
>AK000633-1|BAA91298.1| 450|Homo sapiens protein ( Homo sapiens
cDNA FLJ20626 fis, clone KAT04007. ).
Length = 450
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 433 QCPGPRVWEALPRVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
Q PGP WE L + AP +PG + P + P P
Sbjct: 284 QGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETRLEPAATP 328
>AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 470 RAPPRGVRVAGGSMSGAARVGGAPPGQCLGASP 372
R PP G G + G APPG ASP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASP 57
>AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 470 RAPPRGVRVAGGSMSGAARVGGAPPGQCLGASP 372
R PP G G + G APPG ASP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASP 57
>AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1097
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 470 RAPPRGVRVAGGSMSGAARVGGAPPGQCLGASP 372
R PP G G + G APPG ASP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASP 57
>AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1062
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 470 RAPPRGVRVAGGSMSGAARVGGAPPGQCLGASP 372
R PP G G + G APPG ASP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASP 57
>AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1075
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 470 RAPPRGVRVAGGSMSGAARVGGAPPGQCLGASP 372
R PP G G + G APPG ASP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASP 57
>AF044414-1|AAC00190.2| 1062|Homo sapiens alpha mannosidase 6A8B
protein.
Length = 1062
Score = 29.1 bits (62), Expect = 9.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = -2
Query: 448 ASLVAQCPGPR---VWEALP--RVSVSAPHQKPGPHYLEYGVEPDSLKYAPEPPP 299
A+L A PGP + LP R+ V A + G H L P S+ YAP PPP
Sbjct: 612 AALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVP-SMGYAPVPPP 665
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,516,473
Number of Sequences: 237096
Number of extensions: 1825628
Number of successful extensions: 5842
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5826
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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