Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319G08f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 55 3e-08
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 48 3e-06
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 42 2e-04
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 40 0.001
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 32 0.32
03_05_0834 - 28051067-28051381,28051675-28052120,28052330-280526... 31 0.56
08_02_1413 + 26897815-26899299 30 0.98
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 30 1.3
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 29 2.3
11_06_0710 - 26492093-26493460 28 5.2
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 28 5.2
02_02_0151 - 7220335-7220819,7220933-7223507 28 5.2
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 28 5.2
08_02_1312 + 26055372-26056056,26056935-26057187,26057277-260580... 27 6.9
08_01_0817 - 7941225-7941330,7941456-7942384,7943498-7943574,794... 27 9.1
06_03_0447 + 20878444-20878821 27 9.1
04_04_1332 + 32718584-32718706,32718892-32718960,32719069-327191... 27 9.1
03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,446... 27 9.1
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 27 9.1
01_03_0041 - 11890135-11890425,11890834-11890908,11891010-118910... 27 9.1
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 55.2 bits (127), Expect = 3e-08
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 11/98 (11%)
Frame = +3
Query: 129 EAQRWIESVIG----ERFPSDLPYELALRDGIILCKLMNRLQPGIIPKV--NIS-----G 275
+A W+ESVIG R PS+ + A+R+GI+LCK +N++QPG +PKV N S
Sbjct: 29 QAATWLESVIGPFGLSRCPSEQEFVAAVRNGIVLCKAINKIQPGAVPKVVANASCDSQPS 88
Query: 276 GDYKFMDNISQFQKACIKYGVPDVDLFQTTDLWDQKNI 389
+++ +NI F A + +P F+ +DL ++ NI
Sbjct: 89 TAFQYFENIRNFLVAVQELKLP---CFEASDL-EKDNI 122
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 48.4 bits (110), Expect = 3e-06
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Frame = +3
Query: 129 EAQRWIESVIG-------ERFPSDLPYELALRDGIILCKLMNRLQPGIIPKVNISGGD-- 281
EA W+ V+G PS+ + L LR+GI+LC +N++QPG +PKV + D
Sbjct: 58 EAANWLRRVVGVVCGKDLAEEPSEEEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDSA 117
Query: 282 -------YKFMDNISQFQKACIKYGVPDVDLFQTTDL 371
Y++ +N+ F G+P F+ +DL
Sbjct: 118 DGAALCAYQYFENVRNFLMGLQDLGLP---TFEASDL 151
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Frame = +3
Query: 120 KEAEAQRWI---ESVIGERFP---SDLPYELALRDGIILCKLMNRLQPGIIPKV 263
+ EA RW+ E+ E P S+ + +ALR+G++LC ++N + PG +PKV
Sbjct: 25 RRCEAARWLRQMEAAAAESLPERPSEEEFCVALRNGLVLCNVLNHVNPGAVPKV 78
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Frame = +3
Query: 99 AGKREPEKEA---EAQRWIESVIGERFPSDLPYE-------LALRDGIILCKLMNRLQPG 248
A +R E A EA W+ +G DLP E L LR+G ILC +NR+ PG
Sbjct: 33 ASRRAEEAAARRNEAAGWLRRTVGAVAARDLPEEPSEEEFRLGLRNGQILCGALNRVHPG 92
Query: 249 IIPK 260
+PK
Sbjct: 93 AVPK 96
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +3
Query: 102 GKREPEKEAEAQRWIESVIGER-FP---SDLPYELALRDGIILCKLMNRLQPGIIPKVNI 269
G + ++ AE W+ +++ E P SD L DG +LC ++N L PG++ +
Sbjct: 10 GLQAADRRAEVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEE--- 66
Query: 270 SGGDYKFMD----NISQFQKACIKYGVP 341
S G Y D ++ +F G+P
Sbjct: 67 SWGAYASSDQHAGHVKKFLAVVADMGLP 94
>03_05_0834 -
28051067-28051381,28051675-28052120,28052330-28052671,
28053170-28053310,28053419-28053489,28053575-28053640,
28053874-28054017,28054149-28054207,28054246-28054369,
28054730-28054862,28055138-28055187,28055715-28055824,
28057355-28057436,28057536-28057705,28057812-28058498,
28058645-28058794,28058908-28059039,28059444-28059594,
28060253-28060344,28062478-28062585
Length = 1190
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 270 SGGDYKFMDNISQFQKACIKYGVPDVDLFQTTDLWDQKNIVLVTQTIFAIGRTA 431
S G Y + F K C G+ +DLF +D+ +++N+ V I + + A
Sbjct: 102 SNGKYMPYPKVDSFLKICQILGLAGIDLFTPSDVVEKRNVRKVCMCIRLLSKKA 155
>08_02_1413 + 26897815-26899299
Length = 494
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 99 AGKREPEKEAEAQRWIESVIGERFPSDLPYELALRD 206
AGK E E EA W+ I ER P +P L+D
Sbjct: 288 AGKEEEEDEAFWDEWLAKPIHERVPWQMPPATELQD 323
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 171 PSDLPYELALRDGIILCKLMNRLQPGII 254
P+D +RDG++LCKL+N PG I
Sbjct: 157 PTDNQLFDLVRDGVLLCKLINLAVPGTI 184
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 198 LRDGIILCKLMNRLQPGII 254
+RDG++LCKL+N PG I
Sbjct: 163 VRDGVLLCKLINVAVPGTI 181
>11_06_0710 - 26492093-26493460
Length = 455
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 91 GSALVNANQKKRQKLNGGLNRLSVSGSLP 177
G+A +A+ +K+ NGGL +SV S+P
Sbjct: 49 GAAAAHASPEKKPGSNGGLTTMSVGESVP 77
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 174 SDLPYELALRDGIILCKLMNRLQPGIIPKVNISGGDYKFMDNISQFQKACIKYGVPDVDL 353
+D AL G +LC L+ RL PG + D DN+ +F+ A + GV
Sbjct: 43 TDEDLRAALATGRLLCALLRRLCPGALL-------DDASTDNVGRFRAAVERMGVAK--- 92
Query: 354 FQTTDLWDQKNIVLVTQTIFAI 419
F +DL ++ + V I A+
Sbjct: 93 FSASDL-ERGQMTAVVNCILAL 113
>02_02_0151 - 7220335-7220819,7220933-7223507
Length = 1019
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 10 SVCSL*ILLYCDNLKNPLLSKCPDVLFGSALVNANQKKRQKLNGGL 147
SVCSL L Y D N L P VL+G + + +L+G L
Sbjct: 81 SVCSLKNLTYIDLSCNNLTGDFPTVLYGCSALEFLDLSNNQLSGRL 126
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 201 RDGIILCKLMNRLQPGII 254
+DG++LCKL+N PG I
Sbjct: 194 KDGVLLCKLINLAVPGTI 211
>08_02_1312 +
26055372-26056056,26056935-26057187,26057277-26058081,
26058828-26058952,26059081-26059165,26059473-26059626,
26059724-26059761,26059842-26060109,26060257-26060380,
26060508-26060868,26061904-26062272,26062528-26062609,
26063042-26063193
Length = 1166
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 490 LFSSAGLGPRKGPRHSGCLYAVLPIAKIVCV----TNTIFF*SHK 368
+F++AG G R+G S +P+ ++CV +N + + HK
Sbjct: 139 VFAAAGCGARRGDEESAPFRESVPVPPVLCVEADASNALVWTGHK 183
>08_01_0817 -
7941225-7941330,7941456-7942384,7943498-7943574,
7944911-7945286
Length = 495
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 272 WGRLQVHG*HQPIPKGLHQIWCARCRPFPNYGFVGSKEYRISHT 403
W L+V G H P P+G H C + +G +G R+ T
Sbjct: 234 WRLLEV-GPHAPYPRGAHAACCVDDKFIVIHGGIGQSGSRLGDT 276
>06_03_0447 + 20878444-20878821
Length = 125
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 471 WVRGRGRAIPGVCMPFYQ 418
W RGRGR P C+P Q
Sbjct: 24 WRRGRGRVTPSRCLPSRQ 41
>04_04_1332 +
32718584-32718706,32718892-32718960,32719069-32719155,
32719865-32719971,32720066-32720187,32720462-32720535,
32720833-32720946,32721100-32721213
Length = 269
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 207 GIILCKLMNRLQPGIIP--KVNISG-GDYKFMDNISQFQ 314
G + C+LM+ + PG++P KVN +Y + N Q
Sbjct: 45 GAVQCQLMDMVHPGVVPMHKVNFDAKTEYDMIQNYKILQ 83
>03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,
4469273-4469314,4469496-4469572,4469671-4469755,
4469818-4469901,4469988-4470089,4470181-4470279,
4470794-4470919
Length = 1193
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -1
Query: 275 PRDVDFRNNTGLESVHQLAKDDAVTESQLVGKVGREPLTDNRFNPPLSFCLF 120
P +V NN G E + KDD TE + G P ++ PPL +F
Sbjct: 878 PLEVHLDNN-GHEISRKKFKDDCCTEEGGDSETGDAPSNRAKYTPPLMDVVF 928
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1
Query: 323 ASLLELADV---IHELVVSPRDVDFRNNTGLESVHQLAKDDAVTESQLVGK 180
A + +LAD I EL + D D RNN +S+ +L +D +E+ LV +
Sbjct: 1234 AIMKQLADAQVEIGELQRNLEDADRRNNQLQDSLQRLVEDATTSEALLVAE 1284
>01_03_0041 -
11890135-11890425,11890834-11890908,11891010-11891093,
11891188-11891267,11892051-11892171
Length = 216
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 320 SLLELADVIHELVVSPRDVDFRNNTGLESVHQLAKDDAVTESQLVGKVGREPLTD 156
++LELA V+ + + ++FR NT + H+ K D +L+G + PL +
Sbjct: 145 TMLELAKVVQDTIDPNARIEFRPNTA-DDPHK-RKPDITRAKELLGWEPKVPLRE 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,513,982
Number of Sequences: 37544
Number of extensions: 339836
Number of successful extensions: 927
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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