Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319G07f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53209-1|AAC50658.1|  282|Homo sapiens transformer-2 alpha protein.    40   0.005
BC017094-1|AAH17094.1|  282|Homo sapiens transformer-2 alpha pro...    40   0.005
AC023105-1|AAQ96870.1|  282|Homo sapiens unknown protein.              40   0.005
AB097048-1|BAC77401.1|  282|Homo sapiens putative MAPK activatin...    40   0.005
U68063-1|AAB08701.1|  288|Homo sapiens transformer-2 beta protein.     39   0.009
U61267-1|AAC28242.1|  288|Homo sapiens htra2-beta protein.             39   0.009
BC005898-1|AAH05898.1|  288|Homo sapiens splicing factor, argini...    39   0.009
BC000451-1|AAH00451.1|  288|Homo sapiens splicing factor, argini...    39   0.009
BC000160-1|AAH00160.1|  288|Homo sapiens splicing factor, argini...    39   0.009
AK098191-1|BAC05256.1|  252|Homo sapiens protein ( Homo sapiens ...    39   0.009
AF057159-3|AAD19278.1|  188|Homo sapiens transformer-2-beta isof...    39   0.009
AF057159-1|AAD19277.1|  288|Homo sapiens transformer-2-beta isof...    39   0.009
AB209208-1|BAD92445.1|  278|Homo sapiens splicing factor, argini...    39   0.009
U18088-1|AAA98540.1|  323|Homo sapiens 3',5'-cyclic AMP phosphod...    29   9.9  
AF069491-4|AAC35014.1|  323|Homo sapiens cAMP specific phosphodi...    29   9.9  

>U53209-1|AAC50658.1|  282|Homo sapiens transformer-2 alpha protein.
          Length = 282

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 114 NPDPNTCLGVFGLSLYTTER 133


>BC017094-1|AAH17094.1|  282|Homo sapiens transformer-2 alpha
           protein.
          Length = 282

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 114 NPDPNTCLGVFGLSLYTTER 133


>AC023105-1|AAQ96870.1|  282|Homo sapiens unknown protein.
          Length = 282

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 114 NPDPNTCLGVFGLSLYTTER 133


>AB097048-1|BAC77401.1|  282|Homo sapiens putative MAPK activating
           protein protein.
          Length = 282

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 114 NPDPNTCLGVFGLSLYTTER 133


>U68063-1|AAB08701.1|  288|Homo sapiens transformer-2 beta protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 113 NPDPNCCLGVFGLSLYTTER 132


>U61267-1|AAC28242.1|  288|Homo sapiens htra2-beta protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 113 NPDPNCCLGVFGLSLYTTER 132


>BC005898-1|AAH05898.1|  288|Homo sapiens splicing factor,
           arginine/serine-rich 10 (transformer 2 homolog,
           Drosophila) protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 113 NPDPNCCLGVFGLSLYTTER 132


>BC000451-1|AAH00451.1|  288|Homo sapiens splicing factor,
           arginine/serine-rich 10 (transformer 2 homolog,
           Drosophila) protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 113 NPDPNCCLGVFGLSLYTTER 132


>BC000160-1|AAH00160.1|  288|Homo sapiens splicing factor,
           arginine/serine-rich 10 (transformer 2 homolog,
           Drosophila) protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 113 NPDPNCCLGVFGLSLYTTER 132


>AK098191-1|BAC05256.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
           Homo sapiens transformer-2-beta (SFRS10) gene. ).
          Length = 252

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 77  NPDPNCCLGVFGLSLYTTER 96


>AF057159-3|AAD19278.1|  188|Homo sapiens transformer-2-beta isoform
           3 protein.
          Length = 188

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 13  NPDPNCCLGVFGLSLYTTER 32


>AF057159-1|AAD19277.1|  288|Homo sapiens transformer-2-beta isoform
           1 protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 113 NPDPNCCLGVFGLSLYTTER 132


>AB209208-1|BAD92445.1|  278|Homo sapiens splicing factor,
           arginine/serine-rich 10 (transformer 2 homolog,
           Drosophila) va protein.
          Length = 278

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 462 NPTPSRCLGVFGLSLYTTEQ 521
           NP P+ CLGVFGLSLYTTE+
Sbjct: 101 NPDPNCCLGVFGLSLYTTER 120


>U18088-1|AAA98540.1|  323|Homo sapiens 3',5'-cyclic AMP
           phosphodiesterase HSPDE4A7A protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 282 HQPLDRLLAWGFYIFC*LLLAGAASWTGFDYVLW 181
           HQ L+ L  WG  IFC    AG  S T   Y+++
Sbjct: 32  HQELENLNKWGLNIFCVSDYAGGRSLTCIMYMIF 65


>AF069491-4|AAC35014.1|  323|Homo sapiens cAMP specific
           phosphodiesterase 4A variant 2EL protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 282 HQPLDRLLAWGFYIFC*LLLAGAASWTGFDYVLW 181
           HQ L+ L  WG  IFC    AG  S T   Y+++
Sbjct: 32  HQELENLNKWGLNIFCVSDYAGGRSLTCIMYMIF 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,453,395
Number of Sequences: 237096
Number of extensions: 1140049
Number of successful extensions: 2373
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2367
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)