Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319F08f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59303-1|CAA41990.1| 1265|Homo sapiens valyl-tRNA synthetase pro...    37   0.049
M98326-1|AAA81332.1| 1063|Homo sapiens valyl-tRNA synthetase pro...    37   0.049
BX248133-11|CAM26113.1| 1182|Homo sapiens valyl-tRNA synthetase ...    37   0.049
BC012808-1|AAH12808.1| 1264|Homo sapiens valyl-tRNA synthetase p...    37   0.049
BA000025-12|BAB63303.1| 1264|Homo sapiens valyl tRNA synthetase ...    37   0.049
AL671762-1|CAI18211.1| 1264|Homo sapiens valyl-tRNA synthetase p...    37   0.049
AL662899-2|CAI18384.1| 1264|Homo sapiens valyl-tRNA synthetase p...    37   0.049
AL662834-12|CAI17732.1| 1264|Homo sapiens valyl-tRNA synthetase ...    37   0.049
AF134726-10|AAD21819.1| 1264|Homo sapiens G7A protein.                 37   0.049
U28042-1|AAC50823.1|  875|Homo sapiens protein ( Human DEAD box ...    33   0.80 
BC093656-1|AAH93656.1|  875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    33   0.80 
BC093654-1|AAH93654.1|  875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    33   0.80 
BC091521-1|AAH91521.1|  875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    33   0.80 
BC049217-1|AAH49217.1|  745|Homo sapiens DDX10 protein protein.        33   0.80 
AB209884-1|BAD93121.1|  845|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    33   0.80 
AB040537-1|BAB18536.1|  875|Homo sapiens RNA helicase protein.         33   0.80 
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    29   7.5  

>X59303-1|CAA41990.1| 1265|Homo sapiens valyl-tRNA synthetase protein.
          Length = 1265

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1218 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1264


>M98326-1|AAA81332.1| 1063|Homo sapiens valyl-tRNA synthetase protein.
          Length = 1063

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1016 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1062


>BX248133-11|CAM26113.1| 1182|Homo sapiens valyl-tRNA synthetase
            protein.
          Length = 1182

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1135 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1181


>BC012808-1|AAH12808.1| 1264|Homo sapiens valyl-tRNA synthetase
            protein.
          Length = 1264

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1217 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1263


>BA000025-12|BAB63303.1| 1264|Homo sapiens valyl tRNA synthetase
            protein.
          Length = 1264

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1217 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1263


>AL671762-1|CAI18211.1| 1264|Homo sapiens valyl-tRNA synthetase
            protein.
          Length = 1264

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1217 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1263


>AL662899-2|CAI18384.1| 1264|Homo sapiens valyl-tRNA synthetase
            protein.
          Length = 1264

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1217 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1263


>AL662834-12|CAI17732.1| 1264|Homo sapiens valyl-tRNA synthetase
            protein.
          Length = 1264

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1217 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1263


>AF134726-10|AAD21819.1| 1264|Homo sapiens G7A protein.
          Length = 1264

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 504  KLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            +L++   A  Y  KVP+EVQ+ +  KL Q++ E+ K+  AI   + M
Sbjct: 1217 RLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKM 1263


>U28042-1|AAC50823.1|  875|Homo sapiens protein ( Human DEAD box RNA
           helicase-like protein mRNA, complete cds. ).
          Length = 875

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 498 QQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLK 370
           ++AM  +    KVPV+  KIN EKL   Q ++E +L+  + LK
Sbjct: 423 EKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLK 465


>BC093656-1|AAH93656.1|  875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 10 protein.
          Length = 875

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 498 QQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLK 370
           ++AM  +    KVPV+  KIN EKL   Q ++E +L+  + LK
Sbjct: 423 EKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLK 465


>BC093654-1|AAH93654.1|  875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 10 protein.
          Length = 875

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 498 QQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLK 370
           ++AM  +    KVPV+  KIN EKL   Q ++E +L+  + LK
Sbjct: 423 EKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLK 465


>BC091521-1|AAH91521.1|  875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 10 protein.
          Length = 875

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 498 QQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLK 370
           ++AM  +    KVPV+  KIN EKL   Q ++E +L+  + LK
Sbjct: 423 EKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLK 465


>BC049217-1|AAH49217.1|  745|Homo sapiens DDX10 protein protein.
          Length = 745

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 498 QQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLK 370
           ++AM  +    KVPV+  KIN EKL   Q ++E +L+  + LK
Sbjct: 423 EKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLK 465


>AB209884-1|BAD93121.1|  845|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 10 variant protein.
          Length = 845

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 498 QQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLK 370
           ++AM  +    KVPV+  KIN EKL   Q ++E +L+  + LK
Sbjct: 433 EKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLK 475


>AB040537-1|BAB18536.1|  875|Homo sapiens RNA helicase protein.
          Length = 875

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 498 QQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLK 370
           ++AM  +    KVPV+  KIN EKL   Q ++E +L+  + LK
Sbjct: 423 EKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLK 465


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 215 YFNVYIYVAHYTLHFYTFIQLVFYV-*YGFECIFMLQEVFLLIVKETVIMKPILI 54
           Y  VY+Y+  Y ++FY F  +  Y+  Y + C+++   ++L I     I   I I
Sbjct: 26  YIYVYVYIYLY-IYFYIFTYIYLYIFIYIYICLYIYLYIYLYIFTYIYIYLHIFI 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,772,633
Number of Sequences: 237096
Number of extensions: 1162684
Number of successful extensions: 9240
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9239
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)