Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS319F08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ...    40   0.001
Z35663-1|CAA84725.1|  324|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81030-3|CAB02707.1|  138|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
            protein Y87G2A.5 protein.
          Length = 1050

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 17/50 (34%), Positives = 31/50 (62%)
 Frame = -3

Query: 513  TINKLQQAMTAEDYTTKVPVEVQKINTEKLAQSQGEIEKLLSAIETLKLM 364
            ++ K+    ++ DY  KVPV+++ ++ EK A  + EIE + +AI  LK +
Sbjct: 1000 SVKKIGDIQSSADYEQKVPVDIRALDQEKKATLEKEIENITAAIAQLKAL 1049


>Z35663-1|CAA84725.1|  324|Caenorhabditis elegans Hypothetical
           protein T04A8.1 protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = -1

Query: 206 VYIYVAHYTLHFYTFIQLVFYV*YGFECIFMLQEVFLLIVKETVIMKPILIVTLNNQLSL 27
           +Y    HY+L F TF Q +F       C+  L +  L + K+  I+KP+LI+T    L +
Sbjct: 115 MYYAALHYSLGFKTFSQ-IFMSFNRMTCVIFLMK-HLKLWKQ--ILKPVLIITFILPLGV 170

Query: 26  IFYLI 12
           I+ ++
Sbjct: 171 IWKIL 175


>Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical
           protein F46G10.5 protein.
          Length = 765

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -2

Query: 226 LGFIILMYIFM*HIILYIFTRLFSLFFMYNMV 131
           LGF +L+ +F+   +L+ F+RLF  F ++ +V
Sbjct: 190 LGFGVLLSLFVLFGVLFFFSRLFCQFTIFRIV 221


>Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical
           protein F09B12.2 protein.
          Length = 295

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 214 ILMYIFM*HIILYIFTRLFSLFFMYNMVLNVY 119
           I +Y F+ H++L++FT   SLF  Y +   V+
Sbjct: 198 ISIYQFL-HVLLFVFTFTVSLFTFYLLTAQVF 228


>Z81030-3|CAB02707.1|  138|Caenorhabditis elegans Hypothetical
           protein C01G10.5 protein.
          Length = 138

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 218 YYFNVYIYVAHYTLHFYTF 162
           YY+N Y Y   YT ++YT+
Sbjct: 117 YYYNGYYYDTGYTPYYYTY 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,697,378
Number of Sequences: 27780
Number of extensions: 210188
Number of successful extensions: 592
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)