BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS319F07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0327 + 2659822-2660232,2660906-2660959 32 0.24
01_06_1598 + 38535077-38535368,38536381-38536463,38536575-385366... 31 0.56
02_01_0349 + 2511112-2511576 31 0.74
11_01_0771 + 6453130-6454488 30 0.98
12_02_0304 + 17112677-17113195 30 1.3
04_04_0427 + 25137036-25137119,25137687-25137826,25139775-251398... 29 1.7
03_06_0033 - 31186076-31186189,31186274-31186396,31186524-311867... 29 1.7
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666... 29 1.7
10_08_0338 + 16916429-16916650,16916728-16917900 29 3.0
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 29 3.0
02_05_0192 + 26602247-26602617,26602701-26603016 29 3.0
09_03_0132 + 12639828-12639972,12640171-12640250 28 4.0
08_01_0797 + 7711772-7712869 28 4.0
07_01_0091 - 692416-693906 28 4.0
02_03_0258 - 16930027-16930485,16930686-16930991 28 4.0
01_06_0876 - 32654209-32654238,32654357-32654672,32654833-326549... 28 4.0
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 28 5.2
11_03_0122 - 10313934-10314069,10315889-10316319 28 5.2
07_01_0821 + 6631942-6632144,6632155-6632680,6634264-6634619,663... 28 5.2
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 28 5.2
03_06_0063 - 31391870-31392679 28 5.2
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 28 5.2
09_02_0556 + 10637362-10637575,10637728-10637825 27 6.9
09_02_0039 + 3293904-3294584 27 6.9
06_02_0084 - 11547820-11548773 27 6.9
05_03_0665 - 16774043-16774522 27 6.9
05_03_0038 + 7612866-7613132,7615691-7616608 27 6.9
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 27 6.9
04_01_0263 - 3532481-3532656,3532710-3532719,3532754-3532785,353... 27 6.9
03_03_0197 - 15345314-15345995,15346205-15346334,15346453-15346594 27 6.9
03_02_0305 - 7280414-7280770 27 6.9
10_01_0086 - 1064650-1065379,1065796-1065950,1066029-1066141,106... 27 9.1
04_03_0665 - 18506221-18506271,18506331-18506401,18507097-185071... 27 9.1
02_05_0211 - 26800089-26800439,26800458-26800649,26800721-268007... 27 9.1
02_01_0171 - 1179095-1179388,1179668-1179801,1180036-1180900,118... 27 9.1
01_06_1691 - 39215192-39215283,39215341-39215413,39215874-392166... 27 9.1
01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078 27 9.1
>01_01_0327 + 2659822-2660232,2660906-2660959
Length = 154
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 363 SSPALLGHHEASSRAPQAPPV-APRSPILQPLPV 265
SSP LG AS+R APP PR P L PL V
Sbjct: 92 SSPRTLGRSSASARGDDAPPFHLPRRPPLPPLLV 125
>01_06_1598 +
38535077-38535368,38536381-38536463,38536575-38536643,
38537127-38537182,38537275-38537354,38537496-38537578,
38537682-38537759,38538133-38538201,38538366-38538434,
38538520-38538566,38538656-38538746,38538839-38538892
Length = 356
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 224 RPRKGQNT*RNWLTTGSGCRMGERGATGGAWGARDDASWW 343
RP +G T + G G R+G RGA GG G D +WW
Sbjct: 25 RPMEGGRTGARGASGGGG-RLGARGAAGG--GRGDLGAWW 61
>02_01_0349 + 2511112-2511576
Length = 154
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 251 RNWLTTGSGCRMGERGATG-GAWGARDDASWWPSSAGEL 364
RNW G GCR G TG GAR W GE+
Sbjct: 32 RNWRRGGDGCRSGGWQDTGETVMGARSAGRWSQRMGGEI 70
>11_01_0771 + 6453130-6454488
Length = 452
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 326 DDASWWPSSAGELQHQQ--QLNEEIGTSTATTSQQM 427
DD S WP G++QH+ ++NEE + A T +M
Sbjct: 375 DDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRM 410
>12_02_0304 + 17112677-17113195
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 343 PPRGIVARTPSAPRRAP----FAHPTTAACGQPVPLCILSFSRPFKI 215
PPR R P +PRRAP A PT A P P +++ S+P +
Sbjct: 30 PPRRNPPRAPPSPRRAPSPSVTAEPTPAPVIAPSPPPVVAPSQPLVV 76
>04_04_0427 +
25137036-25137119,25137687-25137826,25139775-25139846,
25141160-25141470,25141595-25141705,25143548-25143640,
25144063-25144212,25145062-25145120,25145636-25145693,
25146351-25146622
Length = 449
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 327 SRAPQAPPVAPRSPILQ-PLPVVNQFLYVFCPFRGRLRYIKL 205
SRAP PP + P+L+ LP+ QF Y CP+R RL + L
Sbjct: 398 SRAPSIPPGSKGRPLLRFCLPL--QFYYC-CPYRVRLASVYL 436
>03_06_0033 -
31186076-31186189,31186274-31186396,31186524-31186718,
31186805-31186930,31187024-31187186,31187270-31187405,
31187557-31187916,31188026-31188124,31188222-31188489
Length = 527
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 369 CCSSPALLGHHEASSRAPQAPPVAPRSPILQPLPVVN 259
C SS L ASS P PP P + I QP+P+V+
Sbjct: 177 CSSSGGGLKESAASSTRPPFPPSIPSNKI-QPMPIVS 212
>01_01_0854 +
6662533-6662652,6662727-6662996,6663118-6663171,
6663723-6663784,6663940-6664008,6664082-6664133,
6664287-6664460
Length = 266
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 348 LGHHEASSRAPQAPPVAPRSPILQPLPVVN 259
L HH A++RAP PP PR L VV+
Sbjct: 14 LPHHRATTRAPPTPPRIPRRARLPGRSVVS 43
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Frame = +2
Query: 269 GSGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTATTSQ--------- 421
GSG + G GA G WG + + + S G N A TSQ
Sbjct: 310 GSGYQGGPPGANRGPWGGQAPSGYGTGSYGGNAGYAAWNNSSAGGNAPTSQAAGAGTGYG 369
Query: 422 -QMYSYKMSGGFTSNGNN 472
Q Y Y GG S GN+
Sbjct: 370 SQGYGYGGYGGDASYGNH 387
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 354 ALLGHHEASSRAPQAPPVAPRSPILQPLP 268
A HH PQAPP P QP+P
Sbjct: 2 AFFSHHHLQQPHPQAPPPPPPQQQQQPVP 30
>02_05_0192 + 26602247-26602617,26602701-26603016
Length = 228
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 218 LKRPRK---GQNT*RNWLTTGSGCRMGERGATGGAWGARDDASWW 343
L+RPR+ G R W + G C R G+W R A+WW
Sbjct: 42 LQRPRRLSAGSGCGR-WWSAGDACWRQRRRCGRGSWRRRLLAAWW 85
>09_03_0132 + 12639828-12639972,12640171-12640250
Length = 74
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 336 EASSRAPQAPPVAPRSPILQPLPVVNQFLYVFC 238
+ + RA PP+ P SP LP+ +Q Y FC
Sbjct: 30 QETCRALCLPPLCPLSPYPARLPIDDQNTYEFC 62
>08_01_0797 + 7711772-7712869
Length = 365
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 378 CCWCCSSPALLGHHEASSRAPQAPPVAPRSPILQPLP--VVNQFLYVFC 238
C W SSP L ++S P++P PRS + +VN L V C
Sbjct: 102 CNWSRSSPRLFDSSDSSRFGPRSPLFIPRSDLEMEESGYIVNDRLTVEC 150
>07_01_0091 - 692416-693906
Length = 496
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 324 RAPQAPPVAPRSPIL-QPLPV 265
RAP PP APR+P+ PLP+
Sbjct: 222 RAPPPPPPAPRAPVYHHPLPL 242
>02_03_0258 - 16930027-16930485,16930686-16930991
Length = 254
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 251 RNWLTTGSGCRMGERGATGGAWGAR 325
R W S C+ GE A G WG R
Sbjct: 161 RVWAPMWSSCQQGEGDAGAGGWGGR 185
>01_06_0876 -
32654209-32654238,32654357-32654672,32654833-32654901,
32655238-32655275,32655418-32655478,32655550-32655617,
32655729-32655889,32656687-32656751,32656883-32656956,
32658158-32658245,32658800-32658879,32659168-32659224,
32659332-32659404,32659524-32659762,32659846-32660025,
32660150-32660440
Length = 629
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 360 SPALLGHHEASSRAPQAPPVAPRSPILQPLPVVNQFLYVFCPFRGRLR 217
S L AS R PP A R+P+ +P ++ F FRG L+
Sbjct: 21 SSRLAPRRVASHRTVAPPPAARRAPLSEPDVGISLFASALPGFRGALK 68
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 269 GSGCRMGERGATGGAWGARDDASWWPSSAGELQH 370
GSG GE G GG G R A WW GE QH
Sbjct: 682 GSGMGGGEWG--GGEMG-RIMAQWWMGRRGESQH 712
>11_03_0122 - 10313934-10314069,10315889-10316319
Length = 188
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 352 ATWPPRGIVARTPSAPRRAPFAHPTTA-ACGQPVPLCIL 239
A W RG++ T + R P P A C P PL +L
Sbjct: 103 AKWAARGVIQVTVTHHRTPPLRQPGEARVCRPPPPLLVL 141
>07_01_0821 +
6631942-6632144,6632155-6632680,6634264-6634619,
6634683-6634877,6635419-6635623
Length = 494
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 359 ELQHQQQLNEEIGTSTATTSQQMYSYKMSG 448
EL+HQ+Q+N ++ +TA + S SG
Sbjct: 446 ELRHQEQMNRKLSIATAAEEAKQLSIPCSG 475
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 339 HEASSRAPQAPPVAPRSPILQPL 271
H A A + PP +PR P++ P+
Sbjct: 71 HRAGGEAHRPPPGSPRQPVISPM 93
>03_06_0063 - 31391870-31392679
Length = 269
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -3
Query: 390 SSFNCCWC---CSSPALLGHHEASSRAPQAPPVAPRSPILQPLPV 265
+ F C C SS LG H+ S R P P +P+L P PV
Sbjct: 95 AEFKCSVCGKSFSSYQALGGHKTSHRVKL--PTPPAAPVLAPAPV 137
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -2
Query: 421 LTCSGCTSAYFFI*LLLVLQFTCATWPPRGIVARTPSA-----PRRAPFAHPTTAACGQP 257
LT +S+ FF L+LVL +C+ P G R+P+A P P P T P
Sbjct: 6 LTPLSSSSSRFFFLLVLVLVLSCSL-PANGRTHRSPAAAASPSPGPGPSPAPATPRVVPP 64
Query: 256 VP 251
P
Sbjct: 65 AP 66
>09_02_0556 + 10637362-10637575,10637728-10637825
Length = 103
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 363 SSP-ALLGHHEASSRAPQAPPVAPRSPILQPLPV 265
S+P A+ G H + A A P PRSP L +PV
Sbjct: 29 STPSAVSGRHRRRAPATLAVPPLPRSPSLSSVPV 62
>09_02_0039 + 3293904-3294584
Length = 226
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 269 GSGCRMGERGAT-GGAWGARDDASWWPSSAGELQHQQQ 379
G G G RG+ GGA G+RD + W G Q +++
Sbjct: 104 GGGRGGGTRGSRDGGAGGSRDGGARWQRGRGSGQRERE 141
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 269 GSGCRMGERGATGGAWGARDDA-SWWP 346
GSG R+G G G G R A WWP
Sbjct: 128 GSGGRLGAGGGDRGQLGMRGAADGWWP 154
>05_03_0665 - 16774043-16774522
Length = 159
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 344 PSSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSY 487
P S+ H +S++ T+ +S K +GGF +NG+ Y
Sbjct: 20 PPSSASFPHSNGYYLPSSSSSSPTANGYFSSKGTGGFAANGDRRIEIY 67
>05_03_0038 + 7612866-7613132,7615691-7616608
Length = 394
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 345 GHHEASSRAPQAPPVAPRSPI 283
G E SSR PQ PP P PI
Sbjct: 56 GDGEGSSRQPQTPPHQPNVPI 76
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
Frame = +2
Query: 269 GSGCRMGERGATGGA-----WGARDDASWWPS---SAGELQHQQQLNEEIGT 400
G GC E G T + W R + SWWP EL Q ++ + GT
Sbjct: 16 GEGCGEAETGITDCSPGIIVWVRRRNGSWWPGRILGPDELPASQVMSPKTGT 67
>04_01_0263 -
3532481-3532656,3532710-3532719,3532754-3532785,
3533237-3533348,3533586-3533649,3533778-3533843,
3533946-3534073,3534205-3534342,3534427-3534539,
3534611-3534776,3535045-3535107,3535197-3535304,
3535408-3535524,3535620-3535785,3535942-3536039,
3536136-3536233,3536378-3536514,3536654-3536878,
3536971-3537176,3537286-3537525
Length = 820
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 331 IVARTPSAPRRAPFAHPTTAACGQPVPL 248
+ A P+ P+R P A P GQP+ L
Sbjct: 33 VPANKPAKPKRFPMARPGLGRKGQPIQL 60
>03_03_0197 - 15345314-15345995,15346205-15346334,15346453-15346594
Length = 317
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 284 MGERGATGGAWGARD---DASWWPSSAGELQHQQQLNEEIGTSTATTS 418
+G A GGAWGA + D ++A +LQ Q L + T+ AT++
Sbjct: 160 VGHAAAAGGAWGAANGAVDYQQADAAAAQLQCLQHLLLQPQTTPATSA 207
>03_02_0305 - 7280414-7280770
Length = 118
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Frame = +2
Query: 224 RPRKGQNT*RNWLTTGSGCRMGERGATGGA---WGARDDASW-----WPSSAG 358
RP +G T + G G R+G RGA GG G R+ W W + AG
Sbjct: 25 RPMEGGRTGARGASGGGG-RLGARGAAGGEGGDLGVRESCRWVWRGLWRTKAG 76
>10_01_0086 -
1064650-1065379,1065796-1065950,1066029-1066141,
1066238-1066345,1066773-1066890,1066996-1067069,
1067595-1067690,1068062-1068455
Length = 595
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 354 ALLGHHEASSRAPQAPPVAPRSP 286
AL HH A+ + P PP PR P
Sbjct: 94 ALALHHAAARQGPPPPPPPPRPP 116
>04_03_0665 -
18506221-18506271,18506331-18506401,18507097-18507169,
18507476-18507805
Length = 174
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +2
Query: 266 TGSGCRMGERGATGGAWG--ARDDASWW 343
+G G R+G RGA GG G + WW
Sbjct: 38 SGGGGRLGARGAAGGGGGDLGTRRSCWW 65
>02_05_0211 -
26800089-26800439,26800458-26800649,26800721-26800792,
26800941-26801126
Length = 266
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 339 HEASSRAPQAPPVAPRSPILQPLPVVNQFLYVFCPFRGRLRYIKLMSCP 193
+E ++R A P + +PLP + + +FC R R +KL+S P
Sbjct: 116 NERTARKRSASVENPCAACARPLPSGHDYCSLFCKVPSRTR-VKLLSSP 163
>02_01_0171 -
1179095-1179388,1179668-1179801,1180036-1180900,
1180998-1181258,1181424-1181621,1181752-1181982,
1185337-1185648,1185750-1186247
Length = 930
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 363 SSPALLGHHEASSRAPQAPPVAPRSPI 283
++PA + ++SS + PP AP+SP+
Sbjct: 131 ATPAAVAAGDSSSSSSSPPPSAPKSPV 157
>01_06_1691 -
39215192-39215283,39215341-39215413,39215874-39216615,
39216730-39217985,39218080-39218187,39218289-39218474,
39218625-39218675
Length = 835
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 323 RDDASWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTS 460
RD A P A + Q QQQ ++ G + T Y SGG T+
Sbjct: 750 RDGAQPVPQQAQQQQQQQQQQQQAGETGNGTMVHSCRYLSSGGPTA 795
>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
Length = 455
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 GQNT*RNWLTTGSGC---RMGERGATGGAWGARDDASWW 343
G+++ WL G R G G GG GA A WW
Sbjct: 85 GRSSPPGWLRPAGGGGRRRGGHGGGAGGGVGAGGGAEWW 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,011,236
Number of Sequences: 37544
Number of extensions: 273619
Number of successful extensions: 1358
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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